RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FZD10Q9ULW2 581 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 U3KQA8 63 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 PTPRQQ9UMZ3 2332 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 GCN1Q92616 2671 aaKnown RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 WASH4PA8MWX3 477 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 RNASEH1O60930 286 aaKnown RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 SRGAP2O75044 1071 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 KRT3P12035 628 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 TCF4P15884 667 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 PRLRP16471 622 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ITGB7P26010 798 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 MAT2AP31153 395 aaKnown RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 NSFP46459 744 aaKnown RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 RXRGP48443 463 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ACADVLP49748 655 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 CLDN6P56747 220 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ACBD5Q5T8D3 534 aaPredicted RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 SASS6Q6UVJ0 657 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ABI3BPQ7Z7G0 1075 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ARHGAP12Q8IWW6 846 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 PCDH20Q8N6Y1 951 aaKnown RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 NPWQ8N729 165 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 RTL3Q8N8U3 475 aaKnown RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ATP11CQ8NB49 1132 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 OR6K2Q8NGY2 324 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 FUBP1Q96AE4 644 aaKnown RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 SERAC1Q96JX3 654 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 PDCL3Q9H2J4 239 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 LRRC19Q9H756 370 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ERVMER34-1Q9H9K5 563 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ATP13A1Q9HD20 1204 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 RALYQ9UKM9 306 aaKnown RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 MYO6Q9UM54 1294 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ITM2BQ9Y287 266 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 NCKAP1Q9Y2A7 1128 aa12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ARHGEF17Q96PE2 2063 aaPredicted RBP12.05□□□□□ -0.48
SRSF4-204ENST00000489898 ZNF106Q9H2Y7 1883 aaKnown RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 BOD1L1Q8NFC6 3051 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 A0A1W2PQC6 194 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 A0A1W2PQU0 124 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 SRRM3A6NNA2 597 aaPredicted RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 C1QTNF3-AMACRE9PGA6 284 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 TLR4O00206 839 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 AREL1O15033 823 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 RNGTTO60942 597 aaKnown RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 TRIM16O95361 564 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 CALB1P05937 261 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 PLEKP08567 350 aaPredicted RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 ADRB3P13945 408 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 L1CAMP32004 1257 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 GRK6P43250 576 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 KRT83P78385 493 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 BNIP3Q12983 259 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 MAMLD1Q13495 774 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 TEAD4Q15561 434 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 SMAD1Q15797 465 aaKnown RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 PROX2Q3B8N5 592 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 ARSIQ5FYB1 569 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 AFMIDQ63HM1 303 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 CAVIN1Q6NZI2 390 aaKnown RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 ERN2Q76MJ5 926 aaKnown RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 TMPRSS7Q7RTY8 843 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 IQCHQ86VS3 1027 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 HORMAD1Q86X24 394 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 ZSWIM9Q86XI8 627 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 CCDC117Q8IWD4 279 aaPredicted RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 TP53INP2Q8IXH6 220 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 PLPP6Q8IY26 295 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 MFSD2AQ8NA29 543 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 NETO2Q8NC67 525 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 MSANTD4Q8NCY6 345 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 ISG20Q96AZ6 181 aaKnown RBP12.04□□□□□ -0.48
SRSF4-204ENST00000489898 TBC1D31Q96DN5 1066 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 HMCESQ96FZ2 354 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 TM6SF2Q9BZW4 377 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 GPATCH2LQ9NWQ4 482 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 AIPL1Q9NZN9 384 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 IL36AQ9UHA7 158 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 DNAI1Q9UI46 699 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 DMTF1Q9Y222 760 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 FADS3Q9Y5Q0 445 aa12.04□□□□□ -0.48
SRSF4-204ENST00000489898 KPNA3O00505 521 aaPredicted RBP12.03□□□□□ -0.48
SRSF4-204ENST00000489898 AP1G1O43747 822 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 FERP16591 822 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 RGRP47804 291 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 DNAJC3Q13217 504 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 ACCSLQ4AC99 568 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 ACAD10Q6JQN1 1059 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 DNAJC24Q6P3W2 148 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 LRRC31Q6UY01 552 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 LEKR1Q6ZMV7 388 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 NYAP1Q6ZVC0 841 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 DSG4Q86SJ6 1040 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 PROSER1Q86XN7 944 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 UMODL1-AS1Q8N2C9 162 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 SLC25A45Q8N413 288 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 OR13H1Q8NG92 308 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 GANCQ8TET4 914 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 ZCCHC14Q8WYQ9 949 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms