RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	FSCN3	Q9NQT6	498 aa		11.29	□□□□□ -0.6
GGA1-222	ENST00000489772	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
GGA1-222	ENST00000489772	HECA	Q9UBI9	543 aa	Predicted RBP	11.29	□□□□□ -0.6
GGA1-222	ENST00000489772	ACTL7A	Q9Y615	435 aa		11.29	□□□□□ -0.6
GGA1-222	ENST00000489772	SPAG17	Q6Q759	2223 aa		11.29	□□□□□ -0.6
GGA1-222	ENST00000489772		H3BRJ5	948 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	PLRG1	O43660	514 aa	Known RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	LEFTY1	O75610	366 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	CD160	O95971	181 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	GSR	P00390	522 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	IGHV4-34	P06331	123 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	TMEM253	P0C7T8	217 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	RARA	P10276	462 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	ERCC2	P18074	760 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	IL1R2	P27930	398 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	ARL4A	P40617	200 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	CCR5	P51681	352 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	CCNH	P51946	323 aa	Predicted RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	SNRPD1	P62314	119 aa	Known RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	FOXK2	Q01167	660 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	SERINC3	Q13530	473 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	TEAD4	Q15561	434 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	DPYSL2	Q16555	572 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	HADH	Q16836	314 aa	Known RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	SMTNL2	Q2TAL5	461 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	UAP1L1	Q3KQV9	507 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	INO80D	Q53TQ3	878 aa	Predicted RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	IL27RA	Q6UWB1	636 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	OR2AP1	Q8NGE2	309 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	C1orf216	Q8TAB5	229 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	TEKT4	Q8WW24	435 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	FAM131C	Q96AQ9	280 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	CELF6	Q96J87	481 aa	Known RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	LRIG1	Q96JA1	1093 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	PACSIN1	Q9BY11	444 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	HDAC8	Q9BY41	377 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	TM6SF2	Q9BZW4	377 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	LRRC19	Q9H756	370 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	OSGEP	Q9NPF4	335 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	CWC15	Q9P013	229 aa	Known RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	CACNA1A	O00555	2505 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	LAMA1	P25391	3075 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	PLXND1	Q9Y4D7	1925 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772		A0A1W2PPC4	97 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	ARHGAP42	A6NI28	874 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	PLK4	O00444	970 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	OPHN1	O60890	802 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	TMCC1	O94876	653 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	TCF4	P15884	667 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	ZNF75D	P51815	510 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	RACK1	P63244	317 aa	Known RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	SLC25A11	Q02978	314 aa	Known RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	GRIK2	Q13002	908 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	DPYS	Q14117	519 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	KRT81	Q14533	505 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	PIP5KL1	Q5T9C9	394 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	AGBL4	Q5VU57	503 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	ERN2	Q76MJ5	926 aa	Known RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	MINDY1	Q8N5J2	469 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	LZTR1	Q8N653	840 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	SKA1	Q96BD8	255 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	MRFAP1L1	Q96HT8	127 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	GDAP1L1	Q96MZ0	367 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	SLC39A8	Q9C0K1	460 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	KLC2	Q9H0B6	622 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	ZDHHC6	Q9H6R6	413 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	PREB	Q9HCU5	417 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	TM9SF3	Q9HD45	589 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	SPTLC3	Q9NUV7	552 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	UBA2	Q9UBT2	640 aa	Predicted RBP	11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	WASF2	Q9Y6W5	498 aa		11.28	□□□□□ -0.6
GGA1-222	ENST00000489772	THADA	Q6YHU6	1953 aa		11.27	□□□□□ -0.6
GGA1-222	ENST00000489772	DFFA	O00273	331 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	KRIT1	O00522	736 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	TM4SF5	O14894	197 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	PRAMEF11	O60813	436 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	PROSC	O94903	275 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	POP4	O95707	220 aa	Known RBP	11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	ITGB7	P26010	798 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	NUDT1	P36639	197 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	GRIA4	P48058	902 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	CSNK1E	P49674	416 aa	Known RBP	11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	PAPOLA	P51003	745 aa	Known RBP	11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	RHOA	P61586	193 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	RAD51	Q06609	339 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	MYLK3	Q32MK0	819 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	AFMID	Q63HM1	303 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	NEK5	Q6P3R8	708 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	FBXL19	Q6PCT2	694 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	POLN	Q7Z5Q5	900 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	ADAT2	Q7Z6V5	191 aa	Known RBP	11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	PRPF39	Q86UA1	669 aa	Known RBP	11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	OR6K2	Q8NGY2	324 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	ARRDC3	Q96B67	414 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	CSPG4P5	Q96PW8	444 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	ORAI3	Q9BRQ5	295 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	OSBPL1A	Q9BXW6	950 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772	SLCO1B1	Q9Y6L6	691 aa		11.27	□□□□□ -0.61
GGA1-222	ENST00000489772		A0A1B0GVT2	93 aa		11.26	□□□□□ -0.61
GGA1-222	ENST00000489772	C10orf142	B7Z368	130 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms