RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 ACTL7AQ9Y615 435 aa18.17■□□□□ 0.5
ABCF3-217ENST00000489719 NCOR2Q9Y618 2525 aa18.17■□□□□ 0.5
ABCF3-217ENST00000489719 SPTBN2O15020 2390 aa18.17■□□□□ 0.5
ABCF3-217ENST00000489719 CEP192Q8TEP8 1941 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 CBFA2T2O43439 604 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 LATO43561 262 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 RNGTTO60942 597 aaKnown RBP18.16■□□□□ 0.5
ABCF3-217ENST00000489719 POP4O95707 220 aaKnown RBP18.16■□□□□ 0.5
ABCF3-217ENST00000489719 CD160O95971 181 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 CTSKP43235 329 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 CCNHP51946 323 aaPredicted RBP18.16■□□□□ 0.5
ABCF3-217ENST00000489719 SNRPD1P62314 119 aaKnown RBP18.16■□□□□ 0.5
ABCF3-217ENST00000489719 PPP2CBP62714 309 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 PPP2CAP67775 309 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 FOXC1Q12948 553 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 PARP15Q460N3 678 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 SETMARQ53H47 684 aaPredicted RBP18.16■□□□□ 0.5
ABCF3-217ENST00000489719 PIP5KL1Q5T9C9 394 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 HGSNATQ68CP4 663 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 FBXL19Q6PCT2 694 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 TRIM69Q86WT6 500 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 RHBDD1Q8TEB9 315 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 TM6SF2Q9BZW4 377 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 XPO4Q9C0E2 1151 aaKnown RBP18.16■□□□□ 0.5
ABCF3-217ENST00000489719 TSPY26PQ9H489 355 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 ARHGAP20Q9P2F6 1191 aa18.16■□□□□ 0.5
ABCF3-217ENST00000489719 C10orf142B7Z368 130 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 RASA4BC9J798 803 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 TLR4O00206 839 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 EEF2KO00418 725 aaKnown RBP18.15■□□□□ 0.5
ABCF3-217ENST00000489719 RASA4O43374 803 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 MAGEC1O60732 1142 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 PCDH8O95206 1070 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 MIPP30301 263 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 PI4KAP42356 2102 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 TAS2R38P59533 333 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 RAD51Q06609 339 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 ACAP1Q15027 740 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 MYLK3Q32MK0 819 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 KCNT1Q5JUK3 1230 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 NAPEPLDQ6IQ20 393 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 PSTKQ8IV42 348 aaKnown RBP18.15■□□□□ 0.5
ABCF3-217ENST00000489719 UMODL1-AS1Q8N2C9 162 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 ARFGAP1Q8N6T3 406 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 MFSD2AQ8NA29 543 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 CASKIN2Q8WXE0 1202 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 LRIG1Q96JA1 1093 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 FEM1CQ96JP0 617 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 TRIM7Q9C029 511 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 NOL6Q9H6R4 1146 aaKnown RBP18.15■□□□□ 0.5
ABCF3-217ENST00000489719 ZDHHC6Q9H6R6 413 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 GDF3Q9NR23 364 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 WASF2Q9Y6W5 498 aa18.15■□□□□ 0.5
ABCF3-217ENST00000489719 CNOT1A5YKK6 2376 aaKnown RBP18.15■□□□□ 0.5
ABCF3-217ENST00000489719 A0A1W2PQU0 124 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 A0A1W2PR77 199 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 PRAMEF26H0Y7S4 382 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 H0Y8X5 98 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 KRIT1O00522 736 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 WNT9AO14904 365 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 GSRP00390 522 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 WNT1P04628 370 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 ITGB7P26010 798 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 CASP14P31944 242 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 CCT8P50990 548 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 NEK3P51956 506 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 FAM193AP78312 1265 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 SHC2P98077 582 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 SERINC3Q13530 473 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 ZNF423Q2M1K9 1284 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 INO80DQ53TQ3 878 aaPredicted RBP18.14■□□□□ 0.49
ABCF3-217ENST00000489719 DBX2Q6ZNG2 339 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 OR2AP1Q8NGE2 309 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 HMCESQ96FZ2 354 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 CNTNAP3BQ96NU0 1288 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 CNTNAP3Q9BZ76 1288 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 NUMA1Q14980 2115 aa18.14■□□□□ 0.49
ABCF3-217ENST00000489719 SLC31A1O15431 190 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 FLRT2O43155 660 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 TRIM16O95361 564 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 GYPCP04921 128 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 PCK1P35558 622 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 ZNF135P52742 658 aaPredicted RBP18.13■□□□□ 0.49
ABCF3-217ENST00000489719 NDST2P52849 883 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 OVGP1Q12889 678 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 PIGHQ14442 188 aaPredicted RBP18.13■□□□□ 0.49
ABCF3-217ENST00000489719 CA9Q16790 459 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 TSR1Q2NL82 804 aaKnown RBP18.13■□□□□ 0.49
ABCF3-217ENST00000489719 BOLA3Q53S33 107 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 PPP6R3Q5H9R7 873 aaPredicted RBP18.13■□□□□ 0.49
ABCF3-217ENST00000489719 PRAMEF14Q5SWL7 426 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 CCDC122Q5T0U0 273 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 ALKBH5Q6P6C2 394 aaKnown RBP18.13■□□□□ 0.49
ABCF3-217ENST00000489719 HORMAD1Q86X24 394 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 OR6K2Q8NGY2 324 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 KLK6Q92876 244 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 ELF4Q99607 663 aaPredicted RBP18.13■□□□□ 0.49
ABCF3-217ENST00000489719 CDC6Q99741 560 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 SNRNP25Q9BV90 132 aaKnown RBP18.13■□□□□ 0.49
ABCF3-217ENST00000489719 OSBPL1AQ9BXW6 950 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms