RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CAND1Q86VP6 1230 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CTAGE3PQ8IX95 158 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF567Q8N184 647 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PYROXD2Q8N2H3 581 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TMEM130Q8N3G9 435 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 KIAA1958Q8N8K9 716 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PPHLN1Q8NEY8 458 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PHOSPHO2Q8TCD6 241 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF398Q8TD17 642 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 LRRC8CQ8TDW0 803 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 DEPDC1BQ8WUY9 529 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CKAP2Q8WWK9 683 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CASP10Q92851 521 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF689Q96CS4 500 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SIGLEC10Q96LC7 697 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TSNARE1Q96NA8 513 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 GCNAQ96QF7 691 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 LGMNQ99538 433 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 IL12RB2Q99665 862 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SIKE1Q9BRV8 207 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TUBB6Q9BUF5 446 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 FSD1LQ9BXM9 530 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SLC25A51Q9H1U9 297 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ACTR5Q9H9F9 607 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TRPC7Q9HCX4 862 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TIMMDC1Q9NPL8 285 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PPANQ9NQ55 473 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CASS4Q9NQ75 786 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 MRGBPQ9NV56 204 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 MARCH5Q9NX47 278 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 MOCS1Q9NZB8 636 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 GMIPQ9P107 970 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ZFATQ9P243 1243 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 KLHL14Q9P2G3 628 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 DCDC2Q9UHG0 476 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 LSM7Q9UK45 103 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 VANGL2Q9ULK5 521 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CHMP2BQ9UQN3 213 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 LZTS1Q9Y250 596 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CDY1Q9Y6F8 540 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 COL4A4P53420 1690 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 SLC12A8A0AV02 714 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 CCDC189A1A4V9 331 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 HEATR9A2RTY3 570 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 DFFAO00273 331 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 COPEO14579 308 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 PRRG1O14668 218 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 KLF11O14901 512 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 BIRC5O15392 142 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ACSL4O60488 711 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 TLR5O60602 858 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 HNRNPCL1O60812 293 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 H2AFYO75367 372 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ATP5HO75947 161 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 PAPSS2O95340 614 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 METTL18O95568 372 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 IL1BP01584 269 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 VIMP08670 466 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 TROVE2P10155 538 aaKnown RBP eCLIP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 KRT4P19013 534 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 DDX6P26196 483 aaKnown RBP eCLIP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 CDC25CP30307 473 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 SSTR1P30872 391 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 OR1D2P34982 312 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 GP5P40197 560 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 MAPK8P45983 427 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 CACNA2D1P54289 1103 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ARPP19P56211 112 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 GPX6P59796 221 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 PDE1BQ01064 536 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 UBE3AQ05086 875 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 CDK18Q07002 472 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 EFEMP1Q12805 493 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 SETDB1Q15047 1291 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 POLD3Q15054 466 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 PDK4Q16654 411 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 DDR2Q16832 855 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 KBTBD12Q3ZCT8 623 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 SPDYAQ5MJ70 313 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ANKRD22Q5VYY1 191 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 KCTD11Q693B1 232 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 PDE12Q6L8Q7 609 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 PSRC1Q6PGN9 363 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 CCDC121Q6ZUS5 278 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 DEFB128Q7Z7B8 93 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 TMEM135Q86UB9 458 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 CHSY1Q86X52 802 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ANKMY2Q8IV38 441 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 SLC39A11Q8N1S5 342 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 OTUD6BQ8N6M0 293 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ATAD1Q8NBU5 361 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 MAFAQ8NHW3 353 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 UHMK1Q8TAS1 419 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF473Q8WTR7 871 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 HERVK_113Q902F9 699 aa6.47□□□□□ -1.37
SF3A3-208ENST00000489537 NDRG1Q92597 394 aaKnown RBP6.47□□□□□ -1.37
SF3A3-208ENST00000489537 TIFAQ96CG3 184 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms