RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZFP14Q9HCL3 533 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 SPAG4Q9NPE6 437 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ATAD3AQ9NVI7 634 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 PNPOQ9NVS9 261 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 CD3EAPO15446 510 aaKnown RBP17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ZBTB14O43829 449 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 IGSF6O95976 241 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 TFEBP19484 476 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ACSM2AQ08AH3 577 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 RAP1GAP2Q684P5 730 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ACSM2BQ68CK6 577 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 GCNT7Q6ZNI0 430 aa17.81■□□□□ 0.44
NPHP4-209ENST00000489180 ITGA2BP08514 1039 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 VAV1P15498 845 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 TKTP29401 623 aaKnown RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ARMC12Q5T9G4 340 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 LLGL2Q6P1M3 1020 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 TPGS1Q6ZTW0 290 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ZNF410Q86VK4 478 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 KIAA0319LQ8IZA0 1049 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 STAG3L4Q8TBR4 150 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 SELENOMQ8WWX9 145 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 MRPL48Q96GC5 212 aaKnown RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 OLFM1Q99784 485 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 C1orf50Q9BV19 199 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ABCG8Q9H221 673 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 HMG20AQ9NP66 347 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 RGSL1A5PLK6 1076 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 CNPP09543 421 aaKnown RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 FNIP1Q8TF40 1166 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 STN1Q9H668 368 aaKnown RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 TMEM134Q9H6X4 195 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ATP6AP2A0A1C7CYW4 349 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 EME2A4GXA9 379 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ATP6AP2O75787 350 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 LGALS2P05162 132 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 MSX2P35548 267 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 MAPK9P45984 424 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 BEX3Q00994 111 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 FOLH1Q04609 750 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 STX4Q12846 297 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 CTBP1Q13363 440 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 PLD1Q13393 1074 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 CRELD2Q6UXH1 353 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 PCSK9Q8NBP7 692 aaKnown RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ALG3Q92685 438 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 NUAK2Q9H093 628 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 CAB39LQ9H9S4 337 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 SORCS3Q9UPU3 1222 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 KIF20BQ96Q89 1820 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 DCDC2CA8MYV0 355 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ABL2P42684 1182 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 GUCA1AP43080 201 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 CCDC157Q569K6 752 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 LRRC38Q5VT99 294 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 SPESP1Q6UW49 350 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 MARK2Q7KZI7 788 aaKnown RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ZDHHC6Q9H6R6 413 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 ABCC13Q9NSE7 274 aa17.8■□□□□ 0.44
NPHP4-209ENST00000489180 NFKBIL1Q9UBC1 381 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-209ENST00000489180 TRIM38O00635 465 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 PAPSS1O43252 624 aaPredicted RBP17.79■□□□□ 0.44
NPHP4-209ENST00000489180 DYRK3O43781 588 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 ATP5F1P24539 256 aaPredicted RBP17.79■□□□□ 0.44
NPHP4-209ENST00000489180 RAB27AP51159 221 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 NOMO3P69849 1222 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 USP7Q93009 1102 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 EPB41L1Q9H4G0 881 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 ARHGAP28Q9P2N2 729 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 SERPINA6P08185 405 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 CCNB1P14635 433 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 STXBP5Q5T5C0 1151 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 ITIH5Q86UX2 942 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 NT5DC4Q86YG4 428 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 PANX3Q96QZ0 392 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 MTG1Q9BT17 334 aaPredicted RBP17.79■□□□□ 0.44
NPHP4-209ENST00000489180 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 TCRBV9S1A1TA0A576 114 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 LINC00032P0C843 101 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 PIRTP0C851 137 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 CYP4F2P78329 520 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 CYP4F3Q08477 520 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 USP4Q13107 963 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 NR1D2Q14995 579 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 ARHGAP36Q6ZRI8 547 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 SHC3Q92529 594 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 ARL8BQ9NVJ2 186 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.79■□□□□ 0.44
NPHP4-209ENST00000489180 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.79■□□□□ 0.444e-6■□□□□ 8.5
NPHP4-209ENST00000489180 MORF4L1Q9UBU8 362 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 ABCA9Q8IUA7 1624 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 DGKAP23743 735 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 EPHX2P34913 555 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 SCNN1GP51170 649 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 INPP4AQ96PE3 977 aaPredicted RBP17.79■□□□□ 0.44
NPHP4-209ENST00000489180 ADAM28Q9UKQ2 775 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 IPPQ9Y573 584 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 N6AMT1Q9Y5N5 214 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 PNMA8CA0A1B0GUJ8 204 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms