RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TRPM6Q9BX84 2022 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 DOCK9Q9BZ29 2069 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 OPHN1O60890 802 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 LEFTY1O75610 366 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 GSRP00390 522 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 TMEM253P0C7T8 217 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 ERCC2P18074 760 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 KCNA4P22459 653 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 NUDT1P36639 197 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 AFF3P51826 1226 aaKnown RBP14.54□□□□□ -0.08
BRCA1-218ENST00000489037 CCNHP51946 323 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-218ENST00000489037 FOXK2Q01167 660 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 CNTN1Q12860 1018 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 TBX2Q13207 712 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-218ENST00000489037 SERINC3Q13530 473 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 KRT81Q14533 505 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 SMTNL2Q2TAL5 461 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 ASTE1Q2TB18 679 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-218ENST00000489037 INO80DQ53TQ3 878 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-218ENST00000489037 KCNT1Q5JUK3 1230 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 IL27RAQ6UWB1 636 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 LEKR1Q6ZMV7 388 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 LZTR1Q8N653 840 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 OR2AP1Q8NGE2 309 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 GRIN3AQ8TCU5 1115 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 LRIG1Q96JA1 1093 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 TM6SF2Q9BZW4 377 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 ZDHHC6Q9H6R6 413 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 OSGEPQ9NPF4 335 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
BRCA1-218ENST00000489037 UBA2Q9UBT2 640 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-218ENST00000489037 NENFQ9UMX5 172 aa14.54□□□□□ -0.08
BRCA1-218ENST00000489037 CABIN1Q9Y6J0 2220 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 A0A1W2PPC4 97 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 PLK4O00444 970 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 CDX4O14627 284 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-218ENST00000489037 PLRG1O43660 514 aaKnown RBP14.53□□□□□ -0.08
BRCA1-218ENST00000489037 PROSCO94903 275 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 POP4O95707 220 aaKnown RBP14.53□□□□□ -0.08
BRCA1-218ENST00000489037 IGSF6O95976 241 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 CTSLP07711 333 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 RARAP10276 462 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 RHOAP61586 193 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 DPYSL2Q16555 572 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 SLC45A4Q5BKX6 768 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 ZFYVE27Q5T4F4 411 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 FBXL19Q6PCT2 694 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 ERN2Q76MJ5 926 aaKnown RBP14.53□□□□□ -0.08
BRCA1-218ENST00000489037 MINDY1Q8N5J2 469 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 CELF6Q96J87 481 aaKnown RBP14.53□□□□□ -0.08
BRCA1-218ENST00000489037 GDAP1L1Q96MZ0 367 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 NOL6Q9H6R4 1146 aaKnown RBP14.53□□□□□ -0.08
BRCA1-218ENST00000489037 LRRC19Q9H756 370 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 SP110Q9HB58 689 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 PREBQ9HCU5 417 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 FSCN3Q9NQT6 498 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 SPTLC3Q9NUV7 552 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 CWC15Q9P013 229 aaKnown RBP14.53□□□□□ -0.08
BRCA1-218ENST00000489037 ACTL7AQ9Y615 435 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 PCNX2A6NKB5 2137 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 SHROOM3Q8TF72 1996 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 PCDH15Q96QU1 1955 aa14.53□□□□□ -0.08
BRCA1-218ENST00000489037 PLXNA2O75051 1894 aa14.52□□□□□ -0.08
BRCA1-218ENST00000489037 DFFAO00273 331 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 KRIT1O00522 736 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 ZNF821O75541 412 aaPredicted RBP14.52□□□□□ -0.09
BRCA1-218ENST00000489037 TMCC1O94876 653 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 CER1O95813 267 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 CD160O95971 181 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 IGHV4-34P06331 123 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 IL1R2P27930 398 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 PAPOLAP51003 745 aaKnown RBP14.52□□□□□ -0.09
BRCA1-218ENST00000489037 ZNF75DP51815 510 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 NEK3P51956 506 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 METAP1P53582 386 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 CDH6P55285 790 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 C21orf59P57076 290 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 RACK1P63244 317 aaKnown RBP14.52□□□□□ -0.09
BRCA1-218ENST00000489037 GRIK2Q13002 908 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 MYLK3Q32MK0 819 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 AGBL4Q5VU57 503 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 NEK5Q6P3R8 708 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 TMCO3Q6UWJ1 677 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 CYP4V2Q6ZWL3 525 aaPredicted RBP14.52□□□□□ -0.09
BRCA1-218ENST00000489037 MAP7D3Q8IWC1 876 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 RHOT2Q8IXI1 618 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 FAM131CQ96AQ9 280 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 ARRDC3Q96B67 414 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 MRFAP1L1Q96HT8 127 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 OSBPL1AQ9BXW6 950 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 PACSIN1Q9BY11 444 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 HDAC8Q9BY41 377 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 SLC39A8Q9C0K1 460 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 TM9SF3Q9HD45 589 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 LUC7LQ9NQ29 371 aaKnown RBP14.52□□□□□ -0.09
BRCA1-218ENST00000489037 AASDHPPTQ9NRN7 309 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 WASF2Q9Y6W5 498 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 SPTBN2O15020 2390 aa14.52□□□□□ -0.09
BRCA1-218ENST00000489037 TP53BP1Q12888 1972 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-218ENST00000489037 TMEM110-MUSTN1A8MSY1 372 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms