RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 LPCAT4Q643R3 524 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 GDF6Q6KF10 455 aaPredicted RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 TFAP2DQ7Z6R9 452 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 LDB1Q86U70 411 aaPredicted RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 CIR1Q86X95 450 aaPredicted RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 NUDCD3Q8IVD9 361 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 ZNF567Q8N184 647 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 TTC9BQ8N6N2 239 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 TTC13Q8NBP0 860 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 DDHD1Q8NEL9 900 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 OR6Y1Q8NGX8 325 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 SLC44A1Q8WWI5 657 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 ZNF669Q96BR6 464 aaPredicted RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 SIGLEC10Q96LC7 697 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 FAM161BQ96MY7 647 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 CYP2S1Q96SQ9 504 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 TRMT13Q9NUP7 481 aaKnown RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 PCDHGB4Q9UN71 923 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 PCDHGB5Q9Y5G0 923 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 ACTL7AQ9Y615 435 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 C15orf38-AP3S2A0A0A6YYH1 394 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 A8MU76 341 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 NT5C1B-RDH14C9J2C7 533 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 EEF2KO00418 725 aaKnown RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 ZBTB24O43167 697 aaPredicted RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 B4GALT3O60512 393 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 RFPL1O75677 317 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 TBX18O95935 607 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 CLPTM1O96005 669 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 JCHAINP01591 159 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 PRKCGP05129 697 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 FYNP06241 537 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 PABPC1P11940 636 aaKnown RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 ERCC2P18074 760 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 LAMA1P25391 3075 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 CHRNA4P43681 627 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 RPL5P46777 297 aaKnown RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 AQP4P55087 323 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 MAXP61244 160 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 ZBTB17Q13105 803 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 SF3B4Q15427 424 aaKnown RBP eCLIP7.77□□□□□ -1.17
BEST3-205ENST00000488961 CRY1Q16526 586 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 N4BP2L1Q5TBK1 243 aaPredicted RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 USP50Q70EL3 339 aaPredicted RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 ARPINQ7Z6K5 226 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 RNF148Q8N7C7 305 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 ANKRD52Q8NB46 1076 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 TRPV1Q8NER1 839 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 ACTRT2Q8TDY3 377 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 VPS50Q96JG6 964 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 SMOQ99835 787 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 OMDQ99983 421 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 GPATCH1Q9BRR8 931 aaKnown RBP7.77□□□□□ -1.17
BEST3-205ENST00000488961 BTBD10Q9BSF8 475 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 KCNK13Q9HB14 408 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 AK5Q9Y6K8 562 aa7.77□□□□□ -1.17
BEST3-205ENST00000488961 DCAF8L1A6NGE4 600 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 K7EPI3 171 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 TNPO2O14787 897 aaKnown RBP7.76□□□□□ -1.17
BEST3-205ENST00000488961 ZBTB11O95625 1053 aaPredicted RBP7.76□□□□□ -1.17
BEST3-205ENST00000488961 ABHD2P08910 425 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 PIRTP0C851 137 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 UBL4AP11441 157 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 TSPAN8P19075 237 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 ATICP31939 592 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 SOX11P35716 441 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 CHN2P52757 468 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 BCAT1P54687 386 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 WASHC5Q12768 1159 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 SPIDRQ14159 915 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 GRB14Q14449 540 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 ADRM1Q16186 407 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 FSCN1Q16658 493 aaKnown RBP7.76□□□□□ -1.17
BEST3-205ENST00000488961 TIGD5Q53EQ6 642 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 BOLA3Q53S33 107 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 WDR45BQ5MNZ6 344 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 FYB2Q5VWT5 728 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 SPRYD7Q5W111 196 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 FBXL19Q6PCT2 694 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 DRICH1Q6PGQ1 229 aaPredicted RBP7.76□□□□□ -1.17
BEST3-205ENST00000488961 ELMSAN1Q6PJG2 1045 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 CLNKQ7Z7G1 428 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 LRRTM3Q86VH5 581 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 FAM20CQ8IXL6 584 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 DCLK2Q8N568 766 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 ZMIZ2Q8NF64 920 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 TFB1MQ8WVM0 346 aaKnown RBP7.76□□□□□ -1.17
BEST3-205ENST00000488961 SKA1Q96BD8 255 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 OXNAD1Q96HP4 312 aaPredicted RBP7.76□□□□□ -1.17
BEST3-205ENST00000488961 ZNF419Q96HQ0 510 aaPredicted RBP7.76□□□□□ -1.17
BEST3-205ENST00000488961 MRPL1Q9BYD6 325 aaKnown RBP7.76□□□□□ -1.17
BEST3-205ENST00000488961 TKTL2Q9H0I9 626 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 CYP3A43Q9HB55 503 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 PAK5Q9P286 719 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 PCDHGA3Q9Y5H0 932 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 LOC285556D6RIA3 1793 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 DOCK6Q96HP0 2047 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 IQANK1A0A1B0GTG1 560 aa7.76□□□□□ -1.17
BEST3-205ENST00000488961 ARL5CA6NH57 179 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms