RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TAB3Q8N5C8 712 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 TXNDC5Q8NBS9 432 aaKnown RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 OR6K2Q8NGY2 324 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 CCDC110Q8TBZ0 833 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 EDAQ92838 391 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 FATE1Q969F0 183 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 MYO19Q96H55 970 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ZNF419Q96HQ0 510 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 IL12RB2Q99665 862 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 MTG2Q9H4K7 406 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 RRAGDQ9NQL2 400 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 LHX3Q9UBR4 397 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 HCN2Q9UL51 889 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 STARD13Q9Y3M8 1113 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 STON1Q9Y6Q2 735 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 MYLKQ15746 1914 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 A0A0A0MRY4 1105 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 TTC24A2A3L6 582 aaPredicted RBP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 WASH3PC4AMC7 463 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 MUSKO15146 869 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 ATP9BO43861 1147 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 GAS8O95995 478 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 ZSCAN5DPP0CG00 497 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 CHRNB1P11230 501 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 HOXB2P14652 356 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 HNRNPLP14866 589 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 NFKB1P19838 968 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 RECQLP46063 649 aaPredicted RBP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 RGRP47804 291 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 TERF1P54274 439 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 MRPS25P82663 173 aaKnown RBP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 MRPS21P82921 87 aaKnown RBP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 DR1Q01658 176 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 DSC2Q02487 901 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 TEX44Q53QW1 395 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 ANKRD20A2Q5SQ80 823 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 ANKRD20A1Q5TYW2 823 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 ANKRD20A3Q5VUR7 823 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 SDE2Q6IQ49 451 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 PID1Q7Z2X4 250 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 PGBD5Q8N414 524 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 TEX26Q8N6G2 289 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 PCDH20Q8N6Y1 951 aaKnown RBP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 GLIS1Q8NBF1 620 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 PJA1Q8NG27 643 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 ATL2Q8NHH9 583 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 CCDC26Q8TAB7 109 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 GDAP1L1Q96MZ0 367 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 SPATA13Q96N96 652 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 CEP44Q9C0F1 390 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 POLR1EQ9GZS1 481 aaKnown RBP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 USP29Q9HBJ7 922 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 AMACRQ9UHK6 382 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 DRG1Q9Y295 367 aaKnown RBP12.51□□□□□ -0.41
TRAIP-209ENST00000488860 VCANP13611 3396 aa12.51□□□□□ -0.41
TRAIP-209ENST00000488860 EDDM13A0A1B0GTR0 161 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 CXorf51AA0A1B0GTR3 108 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 NPC1O15118 1278 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 TTI1O43156 1089 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 OPHN1O60890 802 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 GJB3O75712 270 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 GSRP00390 522 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 PDGFBP01127 241 aaPredicted RBP12.5□□□□□ -0.41
TRAIP-209ENST00000488860 KRT14P02533 472 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 PSMB4P28070 264 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 NTSR1P30989 418 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 STIP1P31948 543 aaKnown RBP12.5□□□□□ -0.41
TRAIP-209ENST00000488860 HSPA9P38646 679 aaKnown RBP12.5□□□□□ -0.41
TRAIP-209ENST00000488860 SCNN1BP51168 640 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 CCNHP51946 323 aaPredicted RBP12.5□□□□□ -0.41
TRAIP-209ENST00000488860 SNRPD1P62314 119 aaKnown RBP12.5□□□□□ -0.41
TRAIP-209ENST00000488860 P3H1Q32P28 736 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 FAXCQ5TGI0 409 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 ITPRIPL1Q6GPH6 555 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 C8orf74Q6P047 294 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 PKN3Q6P5Z2 889 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 CACUL1Q86Y37 369 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 IL17RCQ8NAC3 791 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 OR2AP1Q8NGE2 309 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 FRS2Q8WU20 508 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 RTP4Q96DX8 246 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 PSKH2Q96QS6 385 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 VAT1Q99536 393 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 SEMA3CQ99985 751 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 TRIM51Q9BSJ1 452 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 GBA3Q9H227 469 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 TMEM245Q9H330 911 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 ZDHHC6Q9H6R6 413 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 L2HGDHQ9H9P8 463 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 GLOD4Q9HC38 313 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 PCDH9Q9HC56 1237 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 ASIC3Q9UHC3 531 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 EVLQ9UI08 416 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms