RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MID1O15344 667 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 ZBTB24O43167 697 aaPredicted RBP11.23□□□□□ -0.61
UBE4B-210ENST00000488228 GJB3O75712 270 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 PEX11BO96011 259 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 GSRP00390 522 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 IL1BP01584 269 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 BCKDHBP21953 392 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 TGM2P21980 687 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 PTPN7P35236 360 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 RECQLP46063 649 aaPredicted RBP11.23□□□□□ -0.61
UBE4B-210ENST00000488228 PTPN5P54829 565 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 COPS2P61201 443 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 ZNF235Q14590 738 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 LBRQ14739 615 aaKnown RBP11.23□□□□□ -0.61
UBE4B-210ENST00000488228 RPS6KA1Q15418 735 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 CYTH1Q15438 398 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 CST6Q15828 149 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 ZNF569Q5MCW4 686 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 FAM124AQ86V42 546 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 SLC35F6Q8N357 371 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 ZBTB44Q8NCP5 570 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 OR2AP1Q8NGE2 309 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 CASKIN2Q8WXE0 1202 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 PRCCQ92733 491 aaPredicted RBP11.23□□□□□ -0.61
UBE4B-210ENST00000488228 HDAC11Q96DB2 347 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 SIPA1Q96FS4 1042 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 CCDC114Q96M63 670 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 GDAP1L1Q96MZ0 367 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 TLR10Q9BXR5 811 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 FAM126AQ9BYI3 521 aaPredicted RBP11.23□□□□□ -0.61
UBE4B-210ENST00000488228 CEP41Q9BYV8 373 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 PABPC3Q9H361 631 aaKnown RBP11.23□□□□□ -0.61
UBE4B-210ENST00000488228 SERGEFQ9UGK8 458 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 SARDHQ9UL12 918 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 PCDHGA2Q9Y5H1 932 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 WASF2Q9Y6W5 498 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 MYLKQ15746 1914 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 OTOGLQ3ZCN5 2332 aa11.23□□□□□ -0.61
UBE4B-210ENST00000488228 TCRBV7S2A1N4TA0A589 114 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 KCNK1O00180 336 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 KPNA3O00505 521 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 KRIT1O00522 736 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 KCNK3O14649 394 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 MCF2LO15068 1137 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 ALOX15BO15296 676 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 INSIG1O15503 277 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 KIF5CO60282 957 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 RPP40O75818 363 aaKnown RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 IGSF6O95976 241 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 DNTTP04053 509 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 ZFXP17010 805 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 MX2P20592 715 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 CHRNA3P32297 505 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 TPMTP51580 245 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 NRLP54845 237 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 PPIDQ08752 370 aaKnown RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 PDK1Q15118 436 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 PRKD1Q15139 912 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 MAP7D1Q3KQU3 841 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 GON4LQ3T8J9 2241 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 TTC31Q49AM3 519 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 INO80DQ53TQ3 878 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 CARD16Q5EG05 197 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 SEL1L2Q5TEA6 688 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 CCDC181Q5TID7 509 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 DSG4Q86SJ6 1040 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 CCDC13Q8IYE1 715 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 PGBD5Q8N414 524 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 AADATQ8N5Z0 425 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 TSEN2Q8NCE0 465 aaKnown RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 CCNYQ8ND76 341 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 PIP4K2CQ8TBX8 421 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 ATOH1Q92858 354 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 VOPP1Q96AW1 172 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 ISG20Q96AZ6 181 aaKnown RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 SPACA7Q96KW9 195 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 ZNF599Q96NL3 588 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 USP36Q9P275 1121 aaKnown RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 HECAQ9UBI9 543 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 SEPT3Q9UH03 358 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 IL36AQ9UHA7 158 aa11.22□□□□□ -0.61
UBE4B-210ENST00000488228 EVLQ9UI08 416 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-210ENST00000488228 IGHV1OR15-9A0A0B4J2B8 117 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 CCDC163A0A0D9SF12 145 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 A0A1W2PP55 124 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 TTC24A2A3L6 582 aaPredicted RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 C1QTNF3-AMACRE9PGA6 284 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 APOC4-APOC2K7ER74 178 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 PPP1R12AO14974 1030 aaPredicted RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 HRO43593 1189 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 RNASEH1O60930 286 aaKnown RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 LILRB5O75023 590 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 LEFTY1O75610 366 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 PIGNO95427 931 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ADH1BP00325 375 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 APOC2P02655 101 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ATP1A1P05023 1023 aaKnown RBP11.21□□□□□ -0.61
UBE4B-210ENST00000488228 HLA-DQB2P05538 268 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 UGT2B4P06133 528 aa11.21□□□□□ -0.61
UBE4B-210ENST00000488228 ACADMP11310 421 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms