RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 IGSF6O95976 241 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 CCNCP24863 283 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 CHRNA3P32297 505 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 PLA2G5P39877 138 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 PSMD8P48556 350 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 COPAP53621 1224 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 DMWDQ09019 674 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 AP1B1Q10567 949 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 LBRQ14739 615 aaKnown RBP16■□□□□ 0.15
C9orf3-219ENST00000488186 CYTH1Q15438 398 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 TTC31Q49AM3 519 aaPredicted RBP16■□□□□ 0.15
C9orf3-219ENST00000488186 MARC1Q5VT66 337 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 NPNTQ6UXI9 565 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 BBS12Q6ZW61 710 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 HAUS1Q96CS2 278 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 SPACA7Q96KW9 195 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 GDAP1L1Q96MZ0 367 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 HEPHQ9BQS7 1158 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 MKRN2Q9H000 416 aaKnown RBP16■□□□□ 0.15
C9orf3-219ENST00000488186 BRD8Q9H0E9 1235 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 RSPH9Q9H1X1 276 aaPredicted RBP16■□□□□ 0.15
C9orf3-219ENST00000488186 SEPT3Q9UH03 358 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 IL36AQ9UHA7 158 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 SCML1Q9UN30 329 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 JRKLQ9Y4A0 524 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 CKAP5Q14008 2032 aa16■□□□□ 0.15
C9orf3-219ENST00000488186 MYO15AQ9UKN7 3530 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 KRIT1O00522 736 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 MATN3O15232 486 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 MAP3K13O43283 966 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 POP4O95707 220 aaKnown RBP15.99■□□□□ 0.15
C9orf3-219ENST00000488186 ADH1BP00325 375 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 GSRP00390 522 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 PRNPP04156 253 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 PTPN7P35236 360 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 RPS14P62263 151 aaKnown RBP15.99■□□□□ 0.15
C9orf3-219ENST00000488186 ZBTB16Q05516 673 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 ITKQ08881 620 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 SLC10A2Q12908 348 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-219ENST00000488186 AADACL2Q6P093 401 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 DPY19L3Q6ZPD9 716 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 CEP68Q76N32 757 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 PLPP6Q8IY26 295 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 CCDC13Q8IYE1 715 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 PAF1Q8N7H5 531 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 OR2AP1Q8NGE2 309 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 OR2A12Q8NGT7 310 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 FAM129BQ96TA1 746 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 OMDQ99983 421 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 FERMT1Q9BQL6 677 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 ZDHHC6Q9H6R6 413 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 PDFQ9HBH1 243 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 DYRK4Q9NR20 520 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 SEPT10Q9P0V9 454 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 SAE1Q9UBE0 346 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-219ENST00000488186 INVSQ9Y283 1065 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 FAM186AA6NE01 2351 aa15.99■□□□□ 0.15
C9orf3-219ENST00000488186 PLXND1Q9Y4D7 1925 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 USP27XA6NNY8 438 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 H7C0C1 242 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 APOC4-APOC2K7ER74 178 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 KPNA3O00505 521 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-219ENST00000488186 APOC2P02655 101 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 DMDP11532 3685 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 SLC8A1P32418 973 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 MMP13P45452 471 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 ATP5OP48047 213 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 CCNHP51946 323 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-219ENST00000488186 SLC10A7Q0GE19 358 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 CCDC15Q0P6D6 951 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 CST6Q15828 149 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 MYLK3Q32MK0 819 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 ARSIQ5FYB1 569 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 ATXN7L2Q5T6C5 722 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-219ENST00000488186 ZC3H18Q86VM9 953 aaKnown RBP15.98■□□□□ 0.15
C9orf3-219ENST00000488186 SLC35F6Q8N357 371 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 TTC13Q8NBP0 860 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 TMIEQ8NEW7 156 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 PIP4K2CQ8TBX8 421 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 GRIN3AQ8TCU5 1115 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 TFB1MQ8WVM0 346 aaKnown RBP15.98■□□□□ 0.15
C9orf3-219ENST00000488186 RLN3Q8WXF3 142 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 HDAC11Q96DB2 347 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 FAM122AQ96E09 287 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 PPP1R16AQ96I34 528 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 EXOC2Q96KP1 924 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 TSGA13Q96PP4 275 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 LGMNQ99538 433 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 CD248Q9HCU0 757 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 CYP8B1Q9UNU6 501 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 EML5Q05BV3 1969 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 CHD5Q8TDI0 1954 aa15.98■□□□□ 0.15
C9orf3-219ENST00000488186 OTOGLQ3ZCN5 2332 aa15.97■□□□□ 0.15
C9orf3-219ENST00000488186 ENC1O14682 589 aa15.97■□□□□ 0.15
C9orf3-219ENST00000488186 MID1O15344 667 aa15.97■□□□□ 0.15
C9orf3-219ENST00000488186 NDUFS2O75306 463 aa15.97■□□□□ 0.15
C9orf3-219ENST00000488186 ZNF821O75541 412 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-219ENST00000488186 LEFTY1O75610 366 aa15.97■□□□□ 0.15
C9orf3-219ENST00000488186 RNASEH2AO75792 299 aaKnown RBP15.97■□□□□ 0.15
C9orf3-219ENST00000488186 RPP40O75818 363 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms