RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 F7P08709 466 aaPredicted RBP4.45□□□□□ -1.7
SMC4-219ENST00000487747 ACP5P13686 325 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 CHN1P15882 459 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 MYBPHQ13203 477 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 RPS6KA2Q15349 733 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 PFKFB4Q16877 469 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 FBXL22Q6P050 247 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 XRRA1Q6P2D8 792 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 GALNT7Q86SF2 657 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 RBFAQ8N0V3 343 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 EID2BQ96D98 161 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 TXNDC15Q96J42 360 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 ADGRG7Q96K78 797 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 PIGSQ96S52 555 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 HERC2P3Q9BVR0 1158 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 PABPC3Q9H361 631 aaKnown RBP4.45□□□□□ -1.7
SMC4-219ENST00000487747 NOTCH3Q9UM47 2321 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 DYTNA2CJ06 578 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 FAM90A20PA6NIJ5 464 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 NPIPB11E5RHQ5 1161 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 BMPR1BO00238 502 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 ITGA2BP08514 1039 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 CKMT1AP12532 417 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 ARSAP15289 507 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 SERPINA4P29622 427 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 PDIA3P30101 505 aaKnown RBP4.44□□□□□ -1.7
SMC4-219ENST00000487747 POU3F1Q03052 451 aaPredicted RBP4.44□□□□□ -1.7
SMC4-219ENST00000487747 PDCLQ13371 301 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 PICALMQ13492 652 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 TMEM268Q5VZI3 342 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 RRAGAQ7L523 313 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 RAB11FIP2Q7L804 512 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 BRSK2Q8IWQ3 736 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 PGBD5Q8N414 524 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 ZNF114Q8NC26 417 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 TNIP3Q96KP6 325 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 CXorf56Q9H5V9 222 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 CLK4Q9HAZ1 481 aaKnown RBP4.44□□□□□ -1.7
SMC4-219ENST00000487747 ARNT2Q9HBZ2 717 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 MALT1Q9UDY8 824 aa4.44□□□□□ -1.7
SMC4-219ENST00000487747 C19orf53Q9UNZ5 99 aaPredicted RBP4.44□□□□□ -1.7
SMC4-219ENST00000487747 TMEM247A6NEH6 219 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 PRR23AA6NEV1 266 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 TIMM23O14925 209 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 SP1P08047 785 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 CYP4B1P13584 511 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 AP2B1P63010 937 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 DDR1Q08345 913 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 HLTFQ14527 1009 aaKnown RBP eCLIP4.43□□□□□ -1.75e-35■■■■■ 127.1
SMC4-219ENST00000487747 MRGPRG-AS1Q2M3A8 158 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 SETMARQ53H47 684 aaPredicted RBP4.43□□□□□ -1.7
SMC4-219ENST00000487747 CCDC181Q5TID7 509 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 DGAT2L7PQ6IED9 249 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 SMIM29Q86T20 159 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 FAM186BQ8IYM0 893 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 ZNF527Q8NB42 609 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 TMEM255BQ8WV15 326 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 ATOH1Q92858 354 aaPredicted RBP4.43□□□□□ -1.7
SMC4-219ENST00000487747 C3orf49Q96BT1 292 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 NLKQ9UBE8 527 aa4.43□□□□□ -1.7
SMC4-219ENST00000487747 A0A087WV62 115 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 A0A1B0GVM2 712 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 J3KR12 359 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 TULP2O00295 520 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 PPM1GO15355 546 aaPredicted RBP4.42□□□□□ -1.7
SMC4-219ENST00000487747 PTPN9P43378 593 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 CYP4A11Q02928 519 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 ARL16Q0P5N6 197 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 SNTA1Q13424 505 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 TYW3Q6IPR3 259 aaKnown RBP4.42□□□□□ -1.7
SMC4-219ENST00000487747 AADACL2Q6P093 401 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 RHBDF2Q6PJF5 856 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 PTGR2Q8N8N7 351 aaPredicted RBP4.42□□□□□ -1.7
SMC4-219ENST00000487747 ATG16L2Q8NAA4 619 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 CPT1BQ92523 772 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 IL17FQ96PD4 163 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 MVB12BQ9H7P6 319 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 THAP1Q9NVV9 213 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 HERC5Q9UII4 1024 aaKnown RBP4.42□□□□□ -1.7
SMC4-219ENST00000487747 BAG5Q9UL15 447 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 SLC45A1Q9Y2W3 748 aa4.42□□□□□ -1.7
SMC4-219ENST00000487747 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 SAA2-SAA4A0A096LPE2 208 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 HNRNPRO43390 633 aaKnown RBP4.41□□□□□ -1.7
SMC4-219ENST00000487747 CGAP01215 116 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 MMP3P08254 477 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 DAOP14920 347 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 DCTDP32321 178 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 RPS6KA3P51812 740 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 DLG1Q12959 904 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 DHX34Q14147 1143 aaKnown RBP4.41□□□□□ -1.7
SMC4-219ENST00000487747 SULT6B1Q6IMI4 303 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 ZNF449Q6P9G9 518 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 KLHL17Q6TDP4 642 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 OR4N2Q8NGD1 307 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 SCMH1Q96GD3 660 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 TEFMQ96QE5 360 aaKnown RBP4.41□□□□□ -1.7
SMC4-219ENST00000487747 PLEKHA2Q9HB19 425 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms