RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CATSPERBQ9H7T0 1116 aa4.42□□□□□ -1.7
LINC00888-204ENST00000487386 TTC12Q9H892 705 aaPredicted RBP4.42□□□□□ -1.7
LINC00888-204ENST00000487386 HIF1ANQ9NWT6 349 aa4.42□□□□□ -1.7
LINC00888-204ENST00000487386 GDAQ9Y2T3 454 aa4.42□□□□□ -1.7
LINC00888-204ENST00000487386 A0A1B0GVT2 93 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 KIF1CO43896 1103 aaKnown RBP4.41□□□□□ -1.7
LINC00888-204ENST00000487386 HBP1O60381 514 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 SOX30O94993 753 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 SERPINC1P01008 464 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 HOXC6P09630 235 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 YWHAQP27348 245 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 TKTP29401 623 aaKnown RBP4.41□□□□□ -1.7
LINC00888-204ENST00000487386 HOXD3P31249 432 aaPredicted RBP4.41□□□□□ -1.7
LINC00888-204ENST00000487386 MLH1P40692 756 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 ENTPD1P49961 510 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 CDH12P55289 794 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 GOLGA8FQ08AF8 430 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 SLC18A3Q16572 532 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 SLC4A8Q2Y0W8 1093 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 DNTTIP2Q5QJE6 756 aaKnown RBP4.41□□□□□ -1.7
LINC00888-204ENST00000487386 FNBP1LQ5T0N5 605 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 MAP3K21Q5TCX8 1036 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 OTUD1Q5VV17 481 aaPredicted RBP4.41□□□□□ -1.7
LINC00888-204ENST00000487386 FAM83HQ6ZRV2 1179 aaPredicted RBP4.41□□□□□ -1.7
LINC00888-204ENST00000487386 RBFAQ8N0V3 343 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 SLC35F5Q8WV83 523 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 HERVK_113Q902F9 699 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 REEP2Q9BRK0 252 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 NTPCRQ9BSD7 190 aaKnown RBP4.41□□□□□ -1.7
LINC00888-204ENST00000487386 TMEM204Q9BSN7 226 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 KRTAP1-5Q9BYS1 174 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 STN1Q9H668 368 aaKnown RBP4.41□□□□□ -1.7
LINC00888-204ENST00000487386 PTGDR2Q9Y5Y4 395 aa4.41□□□□□ -1.7
LINC00888-204ENST00000487386 KLK10O43240 276 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 TSPAN3O60637 253 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 CBX6O95503 412 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 ADAP00813 363 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 NGFRP08138 427 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 MMP3P08254 477 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 HSD3B1P14060 373 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 THPOP40225 353 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 SLC18A2Q05940 514 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 ME3Q16798 604 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 ZNF284Q2VY69 593 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 CPOQ8IVL8 374 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 FBXL14Q8N1E6 418 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 IQCF1Q8N6M8 205 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 MCPH1Q8NEM0 835 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 APOLD1Q96LR9 279 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 ZPBPQ9BS86 351 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 LMAN2LQ9H0V9 348 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 ZNF580Q9UK33 172 aa4.4□□□□□ -1.71
LINC00888-204ENST00000487386 SH2D7A6NKC9 451 aaPredicted RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 IKBKBO14920 756 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 ANP32CO43423 234 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 IL1AP01583 271 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CHRM4P08173 479 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CKMT1AP12532 417 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CD72P21854 359 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CCKBRP32239 447 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 RFC1P35251 1148 aaPredicted RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 GPR12P47775 334 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CENPAP49450 140 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CCR5P51681 352 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 EGR4Q05215 589 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CRYZQ08257 329 aaKnown RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 TBL3Q12788 808 aaKnown RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 SLC12A1Q13621 1099 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 HNF4GQ14541 408 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 WDR45BQ5MNZ6 344 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 NCAPH2Q6IBW4 605 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 PDXDC1Q6P996 788 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CRELD2Q6UXH1 353 aaPredicted RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 ANKRD18AQ8IVF6 992 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 LSM14AQ8ND56 463 aaKnown RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 ZMIZ2Q8NF64 920 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 TMEM170AQ8WVE7 144 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 ADAMTS14Q8WXS8 1223 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 HSPH1Q92598 858 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 TMEM18Q96B42 140 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 PHF21BQ96EK2 531 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 THOC3Q96J01 351 aaKnown RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 ZSCAN31Q96LW9 406 aaPredicted RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 MSTO1Q9BUK6 570 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 PHF7Q9BWX1 381 aaPredicted RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 TAOK3Q9H2K8 898 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 MVB12BQ9H7P6 319 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 WDR6Q9NNW5 1121 aaKnown RBP4.39□□□□□ -1.71
LINC00888-204ENST00000487386 RIC8AQ9NPQ8 531 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 IL36RNQ9UBH0 155 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 FZD10Q9ULW2 581 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 MYO6Q9UM54 1294 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 CNPY2Q9Y2B0 182 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 DGKBQ9Y6T7 804 aa4.39□□□□□ -1.71
LINC00888-204ENST00000487386 A0A096LPK6 155 aa4.38□□□□□ -1.71
LINC00888-204ENST00000487386 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.38□□□□□ -1.71
LINC00888-204ENST00000487386 GTPBP1O00178 669 aaKnown RBP4.38□□□□□ -1.71
LINC00888-204ENST00000487386 VWA5AO00534 786 aa4.38□□□□□ -1.71
LINC00888-204ENST00000487386 PEX12O00623 359 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms