RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 MAPK8IP2Q13387 824 aaPredicted RBP22.8■■□□□ 1.24
CDHR3-212ENST00000487084 TEAD4Q15561 434 aa22.8■■□□□ 1.24
CDHR3-212ENST00000487084 SARM1Q6SZW1 724 aa22.8■■□□□ 1.24
CDHR3-212ENST00000487084 LAYNQ6UX15 382 aa22.8■■□□□ 1.24
CDHR3-212ENST00000487084 ADAT2Q7Z6V5 191 aaKnown RBP22.8■■□□□ 1.24
CDHR3-212ENST00000487084 PSTKQ8IV42 348 aaKnown RBP22.8■■□□□ 1.24
CDHR3-212ENST00000487084 CNGA4Q8IV77 575 aa22.8■■□□□ 1.24
CDHR3-212ENST00000487084 C1orf216Q8TAB5 229 aa22.8■■□□□ 1.24
CDHR3-212ENST00000487084 PPP1R16AQ96I34 528 aa22.8■■□□□ 1.24
CDHR3-212ENST00000487084 HEPHQ9BQS7 1158 aa22.8■■□□□ 1.24
CDHR3-212ENST00000487084 HECAQ9UBI9 543 aaPredicted RBP22.8■■□□□ 1.24
CDHR3-212ENST00000487084 WASF2Q9Y6W5 498 aa22.8■■□□□ 1.24
CDHR3-212ENST00000487084 SPTBN2O15020 2390 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 ADAMTS9Q9P2N4 1935 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 CXorf51AA0A1B0GTR3 108 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 A0A1W2PPC4 97 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 MED19A0JLT2 244 aaPredicted RBP22.79■■□□□ 1.24
CDHR3-212ENST00000487084 AKR1B15C9JRZ8 316 aaPredicted RBP22.79■■□□□ 1.24
CDHR3-212ENST00000487084 RNF103O00237 685 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 TMCC1O94876 653 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 ERCC2P18074 760 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 CCR5P51681 352 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 SERINC3Q13530 473 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 NETO2Q8NC67 525 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 ISG20Q96AZ6 181 aaKnown RBP22.79■■□□□ 1.24
CDHR3-212ENST00000487084 CCDC42Q96M95 316 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 SLC6A18Q96N87 628 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 CHP1Q99653 195 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 ZDHHC5Q9C0B5 715 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.79■■□□□ 1.24
CDHR3-212ENST00000487084 PCDH15Q96QU1 1955 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 CACNA1AO00555 2505 aa22.79■■□□□ 1.24
CDHR3-212ENST00000487084 H3BRJ5 948 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 H2AFZP0C0S5 128 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 MAT2AP31153 395 aaKnown RBP22.78■■□□□ 1.24
CDHR3-212ENST00000487084 ARL4AP40617 200 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 NDST2P52849 883 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 SNRPD1P62314 119 aaKnown RBP22.78■■□□□ 1.24
CDHR3-212ENST00000487084 FOXK2Q01167 660 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 CCDC15Q0P6D6 951 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 ASTE1Q2TB18 679 aaPredicted RBP22.78■■□□□ 1.24
CDHR3-212ENST00000487084 BOLA3Q53S33 107 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 ATXN7L2Q5T6C5 722 aaPredicted RBP22.78■■□□□ 1.24
CDHR3-212ENST00000487084 PIP5KL1Q5T9C9 394 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 H2AFVQ71UI9 128 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 NIPA2Q8N8Q9 360 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 OR2AP1Q8NGE2 309 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 FAM131CQ96AQ9 280 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 ORAI3Q9BRQ5 295 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 KDM4CQ9H3R0 1056 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 LRRC19Q9H756 370 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 NHEJ1Q9H9Q4 299 aaPredicted RBP22.78■■□□□ 1.24
CDHR3-212ENST00000487084 EBF2Q9HAK2 575 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 AASDHPPTQ9NRN7 309 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 SPTLC3Q9NUV7 552 aa22.78■■□□□ 1.24
CDHR3-212ENST00000487084 CWC15Q9P013 229 aaKnown RBP22.78■■□□□ 1.24
CDHR3-212ENST00000487084 ARHGAP42A6NI28 874 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 DFFAO00273 331 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 KRIT1O00522 736 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 GSRP00390 522 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 RARAP10276 462 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 GKP32189 559 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 GJC1P36383 396 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 GRIA4P48058 902 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 NOVA1P51513 510 aaKnown RBP22.77■■□□□ 1.24
CDHR3-212ENST00000487084 ZNF135P52742 658 aaPredicted RBP22.77■■□□□ 1.24
CDHR3-212ENST00000487084 RHOAP61586 193 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 TXNRD3NBQ6F5E7 133 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 PSAPL1Q6NUJ1 521 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 ERN2Q76MJ5 926 aaKnown RBP22.77■■□□□ 1.24
CDHR3-212ENST00000487084 SLC39A8Q9C0K1 460 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 RBSNQ9H1K0 784 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 GAREM1Q9H706 876 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 OSGEPQ9NPF4 335 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 UVRAGQ9P2Y5 699 aa22.77■■□□□ 1.24
CDHR3-212ENST00000487084 UBA2Q9UBT2 640 aaPredicted RBP22.77■■□□□ 1.24
CDHR3-212ENST00000487084 CHD5Q8TDI0 1954 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 CNOT1A5YKK6 2376 aaKnown RBP22.76■■□□□ 1.23
CDHR3-212ENST00000487084 KCNK5O95279 499 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 CER1O95813 267 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 IGSF6O95976 241 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 PAPOLAP51003 745 aaKnown RBP22.76■■□□□ 1.23
CDHR3-212ENST00000487084 NEK3P51956 506 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 C21orf59P57076 290 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 TAS2R38P59533 333 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 RACK1P63244 317 aaKnown RBP22.76■■□□□ 1.23
CDHR3-212ENST00000487084 BNC1Q01954 994 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 SLC25A11Q02978 314 aaKnown RBP22.76■■□□□ 1.23
CDHR3-212ENST00000487084 TBX2Q13207 712 aaPredicted RBP22.76■■□□□ 1.23
CDHR3-212ENST00000487084 DPYSQ14117 519 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 KRT81Q14533 505 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 DPYSL2Q16555 572 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 HADHQ16836 314 aaKnown RBP22.76■■□□□ 1.23
CDHR3-212ENST00000487084 KIF19Q2TAC6 998 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 IL27RAQ6UWB1 636 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 PRPF39Q86UA1 669 aaKnown RBP22.76■■□□□ 1.23
CDHR3-212ENST00000487084 NPWQ8N729 165 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 CASKIN2Q8WXE0 1202 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 SERAC1Q96JX3 654 aa22.76■■□□□ 1.23
CDHR3-212ENST00000487084 GDAP1L1Q96MZ0 367 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms