RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TXNDC8Q6A555 127 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 RFWD3Q6PCD5 774 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 PACS1Q6VY07 963 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 METTL3Q86U44 580 aaKnown RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 CNTN4Q8IWV2 1026 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 LMNTD2Q8IXW0 634 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 ARL14EPQ8N8R7 260 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF557Q8N988 423 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 PPHLN1Q8NEY8 458 aaKnown RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 IPMKQ8NFU5 416 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 SPATA22Q8NHS9 363 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 DYDC1Q8WWB3 177 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 SCG3Q8WXD2 468 aaKnown RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 GRAMD1AQ96CP6 724 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 PABPC5Q96DU9 382 aaKnown RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 TMA16Q96EY4 203 aaKnown RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 APOPT1Q96IL0 206 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 FCRL3Q96P31 734 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 FICDQ9BVA6 458 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 FSD1LQ9BXM9 530 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 VPS11Q9H270 941 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 NT5MQ9NPB1 228 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 PPANQ9NQ55 473 aaKnown RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 ZDHHC7Q9NXF8 308 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 UBA2Q9UBT2 640 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 TCAF1Q9Y4C2 921 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 CPQQ9Y646 472 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 HEATR9A2RTY3 570 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 LCHNA4D1U4 455 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 TRIM49D1C9J1S8 452 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 F5H423 210 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 XYLBO75191 536 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 USP12O75317 370 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 RFPL1O75677 317 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 LUC7L3O95232 432 aaKnown RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 FGF1P05230 155 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 DHRS4L1P0CG22 281 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 ALADP13716 330 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 CR2P20023 1033 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 DRD4P21917 467 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 CA4P22748 312 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 WEE1P30291 646 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 CRHR1P34998 444 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 SPRP35270 261 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 NEK3P51956 506 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 WDR4P57081 412 aaKnown RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 NSUN2Q08J23 767 aaKnown RBP eCLIP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 MSLNQ13421 630 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 SLC12A1Q13621 1099 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF235Q14590 738 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 UGP2Q16851 508 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 INSCQ1MX18 579 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 MPPE1Q53F39 396 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 CERCAMQ5T4B2 595 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 TEDDM1Q5T9Z0 273 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 FYB2Q5VWT5 728 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 TTC19Q6DKK2 380 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 KIAA0930Q6ICG6 404 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 CXorf57Q6NSI4 855 aaKnown RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 GALNT7Q86SF2 657 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 CIR1Q86X95 450 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF473Q8WTR7 871 aaKnown RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 SLC22A17Q8WUG5 538 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF669Q96BR6 464 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 CABS1Q96KC9 395 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 LMAN2LQ9H0V9 348 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 TASP1Q9H6P5 420 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 TRPC7Q9HCX4 862 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 ZFATQ9P243 1243 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 DNMT3BQ9UBC3 853 aaKnown RBP11.79□□□□□ -0.52
PRKCB-207ENST00000486868 SH3BP1Q9Y3L3 701 aa11.79□□□□□ -0.52
PRKCB-207ENST00000486868 DOCK4Q8N1I0 1966 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 A0A0D9SEW6 157 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 TIMM44O43615 452 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ATP9BO43861 1147 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 CLASP2O75122 1294 aaKnown RBP11.78□□□□□ -0.52
PRKCB-207ENST00000486868 PMPCBO75439 489 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ZMPSTE24O75844 475 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 SERPINF2P08697 491 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 PSMA3P25788 255 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 CD86P42081 329 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ETV4P43268 484 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 MAGEA12P43365 314 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 CCT5P48643 541 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 PLK1P53350 603 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 SEC24CP53992 1094 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ERVK-21P61565 698 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 CRADDP78560 199 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 SLC20A2Q08357 652 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 SLC1A5Q15758 541 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 PDK4Q16654 411 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ARHGAP15Q53QZ3 475 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 FAM182AQ5T1J6 154 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 IL31Q6EBC2 164 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 KIAA0408Q6ZU52 694 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms