RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TDRD10Q5VZ19 366 aaKnown RBP7.06□□□□□ -1.28
HDAC3-209ENST00000486618 ARL6IP4Q66PJ3 421 aaKnown RBP7.06□□□□□ -1.28
HDAC3-209ENST00000486618 CDPF1Q6NVV7 123 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 CNSTQ6PJW8 725 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 IL27RAQ6UWB1 636 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 CRELD2Q6UXH1 353 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-209ENST00000486618 ARHGEF18Q6ZSZ5 1173 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 SLCO6A1Q86UG4 719 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 C12orf40Q86WS4 652 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 CCDC83Q8IWF9 413 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 SFTPA1Q8IWL2 248 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 KRT222Q8N1A0 295 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 PDZD8Q8NEN9 1154 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.06□□□□□ -1.288e-7■■■■■ 32.1
HDAC3-209ENST00000486618 C1orf74Q96LT6 269 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 CCDC114Q96M63 670 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 AK8Q96MA6 479 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 SYT15Q9BQS2 421 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 TRIM7Q9C029 511 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 RNF38Q9H0F5 515 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 ST6GALNAC4Q9H4F1 302 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 ZWILCHQ9H900 591 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 ZDHHC4Q9NPG8 344 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 LUC7LQ9NQ29 371 aaKnown RBP7.06□□□□□ -1.28
HDAC3-209ENST00000486618 SMPD4Q9NXE4 827 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 CACNA2D2Q9NY47 1150 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 RRN3Q9NYV6 651 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 CWC15Q9P013 229 aaKnown RBP7.06□□□□□ -1.28
HDAC3-209ENST00000486618 ITGA11Q9UKX5 1188 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 PCOLCE2Q9UKZ9 415 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 CDH9Q9ULB4 789 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 EXOC7Q9UPT5 735 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 MAPRE3Q9UPY8 281 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 NFE2L3Q9Y4A8 694 aa7.06□□□□□ -1.28
HDAC3-209ENST00000486618 ASH1LQ9NR48 2969 aaKnown RBP7.06□□□□□ -1.28
HDAC3-209ENST00000486618 A0A087WV48 116 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 TRABD2BA6NFA1 517 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 MEI4A8MW99 385 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 TISP43B9A030 160 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 E9PAM4 449 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 MASP2O00187 686 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 AREL1O15033 823 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 POLR3GO15318 223 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 HOXC11O43248 304 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 CBFA2T3O75081 653 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 GADD45BO75293 160 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 SMC2O95347 1197 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 GUCA1CO95843 209 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 OAS1P00973 400 aaKnown RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 PYGLP06737 847 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 TMEM191BP0C7N4 346 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 IMPDH2P12268 514 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 CD86P42081 329 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 MATKP42679 507 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 WASP42768 502 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 ABCG1P45844 678 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 CYP27A1Q02318 531 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 CYP4F3Q08477 520 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 ST3GAL1Q11201 340 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 TAF10Q12962 218 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 SLC14A2Q15849 920 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 PPP2R5EQ16537 467 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 SOWAHAQ2M3V2 549 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 ANO4Q32M45 955 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 GRAMD4Q6IC98 578 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 PACS1Q6VY07 963 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 OSTM1Q86WC4 334 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 GALNT13Q8IUC8 556 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 CELF2-AS1Q8N7Q2 184 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 NAT16Q8N8M0 369 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 TERB1Q8NA31 727 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 ENGASEQ8NFI3 743 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 EPS8L3Q8TE67 593 aaKnown RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 FBLIM1Q8WUP2 373 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 SCFD1Q8WVM8 642 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 DNASE2BQ8WZ79 361 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 MYLPFQ96A32 169 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 ZSCAN31Q96LW9 406 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 IPO9Q96P70 1041 aaKnown RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 ALPK1Q96QP1 1244 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 XPO6Q96QU8 1125 aaKnown RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 BARD1Q99728 777 aaKnown RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 SH3GL1Q99961 368 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 C7orf25Q9BPX7 421 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 FAM213AQ9BRX8 229 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 GAREM1Q9H706 876 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 ST7Q9NRC1 585 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 TM7SF3Q9NS93 570 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 PCDHGB2Q9Y5G2 931 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 EPN1Q9Y6I3 576 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-209ENST00000486618 MYH10P35580 1976 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 PTPRQQ9UMZ3 2332 aa7.05□□□□□ -1.28
HDAC3-209ENST00000486618 MAST4O15021 2626 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 FAM95CA0A1B0GW59 222 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 A0A1W2PQF6 199 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 F8VP50 259 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 GFRA2O00451 464 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 FLRT2O43155 660 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 MAFKO60675 156 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms