RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ARSIQ5FYB1 569 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 PPP6R3Q5H9R7 873 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-208ENST00000486404 ARTNQ5T4W7 220 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 PIP5KL1Q5T9C9 394 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 LEKR1Q6ZMV7 388 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 ERN2Q76MJ5 926 aaKnown RBP13.13□□□□□ -0.31
CHMP3-208ENST00000486404 TRIM69Q86WT6 500 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 SETD7Q8WTS6 366 aaKnown RBP13.13□□□□□ -0.31
CHMP3-208ENST00000486404 FAM131CQ96AQ9 280 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 GDAP1L1Q96MZ0 367 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 NCAPGQ9BPX3 1015 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 HEPHQ9BQS7 1158 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 SNRNP25Q9BV90 132 aaKnown RBP13.13□□□□□ -0.31
CHMP3-208ENST00000486404 MAGEB5Q9BZ81 275 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 IL21RQ9HBE5 538 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 TM7SF3Q9NS93 570 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 SNX11Q9Y5W9 270 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 TRPM6Q9BX84 2022 aa13.13□□□□□ -0.31
CHMP3-208ENST00000486404 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 RASA4BC9J798 803 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 KRIT1O00522 736 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 RASA4O43374 803 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 RNGTTO60942 597 aaKnown RBP13.12□□□□□ -0.31
CHMP3-208ENST00000486404 GJB3O75712 270 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 TMCC1O94876 653 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 PCDH8O95206 1070 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 IGSF6O95976 241 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 GSRP00390 522 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 CD59P13987 128 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 ITGB7P26010 798 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 CD38P28907 300 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 CASP14P31944 242 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 NEK3P51956 506 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 YBEYP58557 167 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-208ENST00000486404 RHOAP61586 193 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 BNC1Q01954 994 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 ERMARDQ5T6L9 678 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 FBXL19Q6PCT2 694 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 PIP4P1Q86T03 277 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 RNF214Q8ND24 703 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 OR6K2Q8NGY2 324 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 CASKIN2Q8WXE0 1202 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 ISG20Q96AZ6 181 aaKnown RBP13.12□□□□□ -0.31
CHMP3-208ENST00000486404 ARRDC3Q96B67 414 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 HMCESQ96FZ2 354 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 ORAI3Q9BRQ5 295 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 TRIM7Q9C029 511 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 ISCUQ9H1K1 167 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 DEF6Q9H4E7 631 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 GDF3Q9NR23 364 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 HECAQ9UBI9 543 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-208ENST00000486404 DMTF1Q9Y222 760 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 WASF2Q9Y6W5 498 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 SHROOM3Q8TF72 1996 aa13.12□□□□□ -0.31
CHMP3-208ENST00000486404 PCNX2A6NKB5 2137 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 VILLO15195 856 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 FLRT2O43155 660 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 LATO43561 262 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 KDELR3O43731 214 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 SH3BP5O60239 455 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 LRCH4O75427 683 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 PMLP29590 882 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 MIPP30301 263 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 CTSKP43235 329 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 IL9RQ01113 521 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 RAD51Q06609 339 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
CHMP3-208ENST00000486404 TSR1Q2NL82 804 aaKnown RBP13.11□□□□□ -0.31
CHMP3-208ENST00000486404 SPECC1LQ69YQ0 1117 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 RFX8Q6ZV50 586 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 OR2AP1Q8NGE2 309 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 PEBP4Q96S96 227 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 NUP85Q9BW27 656 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 OSBPL1AQ9BXW6 950 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 HDAC8Q9BY41 377 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 THAP2Q9H0W7 228 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 ZWILCHQ9H900 591 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 ZNHIT6Q9NWK9 470 aaKnown RBP13.11□□□□□ -0.31
CHMP3-208ENST00000486404 UBA2Q9UBT2 640 aaPredicted RBP13.11□□□□□ -0.31
CHMP3-208ENST00000486404 ANAPC7Q9UJX3 599 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 KNL1Q8NG31 2342 aa13.11□□□□□ -0.31
CHMP3-208ENST00000486404 A0A087X0T9 212 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 A0A1W2PQU0 124 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 ARHGAP42A6NI28 874 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 WASH4PA8MWX3 477 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 H0Y8X5 98 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 H3BRJ5 948 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 NEMP1O14524 444 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 YKT6O15498 198 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 DFNA5O60443 496 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 MAGEC1O60732 1142 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 ZNF821O75541 412 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-208ENST00000486404 UGT2B4P06133 528 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 FAM228BP0C875 321 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 ADRB3P13945 408 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 PRLRP16471 622 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 ARL4AP40617 200 aa13.1□□□□□ -0.31
CHMP3-208ENST00000486404 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms