RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ATG2BQ96BY7 2078 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 MYO15AQ9UKN7 3530 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 IGLV3-10A0A075B6K4 115 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ARHGAP42A6NI28 874 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 C3orf70A6NLC5 250 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 FAM170BA6NMN3 283 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 WASH4PA8MWX3 477 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 PRRT4C9JH25 899 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 H7C0C1 242 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 MAN2B1O00754 1011 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 KHNYNO15037 678 aaKnown RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 ZNF185O15231 689 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 PI15O43692 258 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 NEBLO76041 1014 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 TJP3O95049 919 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 IL2RAP01589 272 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 FGGP02679 453 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 NID1P14543 1247 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ZFXP17010 805 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 HTR7P34969 479 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 SERPINB6P35237 376 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ETFBP38117 255 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 CDKN2BP42772 138 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ATP5OP48047 213 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 HCAR3P49019 387 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 STK19P49842 368 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 ZNF135P52742 658 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 OXCT1P55809 520 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 GNA12Q03113 381 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 GBE1Q04446 702 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 PRKCQQ04759 706 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ADCY2Q08462 1091 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 AP1B1Q10567 949 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 SNX1Q13596 522 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 TFDP2Q14188 446 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 PLEKHG6Q3KR16 790 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 C5orf22Q49AR2 442 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ACCSLQ4AC99 568 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 PREPLQ4J6C6 727 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 FNDC3BQ53EP0 1204 aaKnown RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 PITRM1Q5JRX3 1037 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 MPP7Q5T2T1 576 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 FSTL4Q6MZW2 842 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ARHGAP36Q6ZRI8 547 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 SETD3Q86TU7 594 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 ZC3H18Q86VM9 953 aaKnown RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 AHI1Q8N157 1196 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.75□□□□□ -1.49
COPS3-208ENST00000486032 PQLC3Q8N755 202 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ZNF366Q8N895 744 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 KIAA1958Q8N8K9 716 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 TMEM105Q8N8V8 129 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 TERB1Q8NA31 727 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ATP11CQ8NB49 1132 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 UCMAQ8WVF2 138 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 P3H4Q92791 437 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ARHGEF2Q92974 986 aaKnown RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 HMCESQ96FZ2 354 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 SHDQ96IW2 340 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 MS4A14Q96JA4 679 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 OSBPL9Q96SU4 736 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 SLC2A11Q9BYW1 496 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 KLC2Q9H0B6 622 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 C10orf88Q9H8K7 445 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 TBC1D17Q9HA65 648 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 LMAN1LQ9HAT1 526 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 SP110Q9HB58 689 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 POLR3BQ9NW08 1133 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 SEPT10Q9P0V9 454 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 RCOR3Q9P2K3 495 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 SAE1Q9UBE0 346 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 WNT16Q9UBV4 365 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 SLC25A13Q9UJS0 675 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 INTS6Q9UL03 887 aaKnown RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 HCN2Q9UL51 889 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 HPCAL4Q9UM19 191 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 MTF2Q9Y483 593 aaPredicted RBP5.75□□□□□ -1.49
COPS3-208ENST00000486032 TTLL3Q9Y4R7 772 aa5.75□□□□□ -1.49
COPS3-208ENST00000486032 ZNF318Q5VUA4 2279 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 NUP205Q92621 2012 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 TCRBV7S2A1N4TA0A589 114 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 KANSL1LA0AUZ9 987 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 ILVBLA1L0T0 632 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 TMEM221A6NGB7 291 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 WASH3PC4AMC7 463 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 F5H423 210 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 J3KR12 359 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 K7EQS6 105 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 K7ERQ8 282 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 M0R296 226 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 URI1O94763 535 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 KLF8O95600 359 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ATP5BP06576 529 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 DCNP07585 359 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ALADP13716 330 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 HLA-EP13747 358 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 GLULP15104 373 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 PECAM1P16284 738 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 DRD1P21728 446 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 TARSP26639 723 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms