RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 C16orf82Q7Z2V1 217 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 GALNT7Q86SF2 657 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 BRSK2Q8IWQ3 736 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 SCN4BQ8IWT1 228 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 PTGR2Q8N8N7 351 aaPredicted RBP4.42□□□□□ -1.7
SMC4-215ENST00000484799 TMEM163Q8TC26 289 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 SLC2A12Q8TD20 617 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 TBC1D22AQ8WUA7 517 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 PPM1EQ8WY54 764 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 FIZ1Q96SL8 496 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 SLC25A33Q9BSK2 321 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 DACT1Q9NYF0 836 aa4.42□□□□□ -1.7
SMC4-215ENST00000484799 MST1RQ04912 1400 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 A0A087WV62 115 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 LINC01553A4QN01 128 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 NPIPB13A6NJU9 1138 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 NPIPB5A8MRT5 1133 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 NPIPB4C9JG80 1138 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 LDB2O43679 373 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 TCEA3O75764 348 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 DHRS4L1P0CG22 281 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 CKMT1AP12532 417 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 CHN1P15882 459 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 PDLIM4P50479 330 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 EEF1A2Q05639 463 aaKnown RBP4.41□□□□□ -1.7
SMC4-215ENST00000484799 PDCLQ13371 301 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 EXOC3L1Q86VI1 746 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 C2CD4CQ8TF44 421 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 HDAC7Q8WUI4 952 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 MTBPQ96DY7 904 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 DDX23Q9BUQ8 820 aaKnown RBP4.41□□□□□ -1.7
SMC4-215ENST00000484799 UBA5Q9GZZ9 404 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 PABPC3Q9H361 631 aaKnown RBP4.41□□□□□ -1.7
SMC4-215ENST00000484799 THAP1Q9NVV9 213 aa4.41□□□□□ -1.7
SMC4-215ENST00000484799 A0A1B0GVM2 712 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 ABHD14A-ACY1A0A1B0GW23 586 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 E7EVH7 732 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 SLC16A5O15375 505 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 TNNT1P13805 278 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 GNLYP22749 145 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 THPOP40225 353 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 TUBA1BP68363 451 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 HNF4GQ14541 408 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 LRRC24Q50LG9 513 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 DCAF6Q58WW2 860 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 FAM83BQ5T0W9 1011 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 SULT6B1Q6IMI4 303 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 RETSATQ6NUM9 610 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 XRRA1Q6P2D8 792 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 C1orf228Q6PIY5 440 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 NEK10Q6ZWH5 1172 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 ARMC9Q7Z3E5 817 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 PATL1Q86TB9 770 aaKnown RBP4.4□□□□□ -1.71
SMC4-215ENST00000484799 SCAIQ8N9R8 606 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 VPS37AQ8NEZ2 397 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 SCAMP5Q8TAC9 235 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 OTUD7AQ8TE49 926 aaPredicted RBP4.4□□□□□ -1.71
SMC4-215ENST00000484799 NCSTNQ92542 709 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 TMEM18Q96B42 140 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 SLITRK1Q96PX8 696 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 HERPUD2Q9BSE4 406 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 PAGR1Q9BTK6 254 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 TCF7L2Q9NQB0 619 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 PRDM8Q9NQV8 689 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 MALT1Q9UDY8 824 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 KCND3Q9UK17 655 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 OSGIN2Q9Y236 505 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 LZTS1Q9Y250 596 aa4.4□□□□□ -1.71
SMC4-215ENST00000484799 OR6C68A6NDL8 312 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 HMGB1P1B2RPK0 211 aaPredicted RBP4.39□□□□□ -1.71
SMC4-215ENST00000484799 SYT5O00445 386 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 CHL1O00533 1208 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 SOCS5O75159 536 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 DDAH2O95865 285 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 SNRNP70P08621 437 aaKnown RBP4.39□□□□□ -1.71
SMC4-215ENST00000484799 SERPINF1P36955 418 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 ARHGAP8P85298 464 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 KIF5AQ12840 1032 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 CHAF1AQ13111 956 aaPredicted RBP4.39□□□□□ -1.71
SMC4-215ENST00000484799 DCTN1Q14203 1278 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 SF3B4Q15427 424 aaKnown RBP eCLIP4.39□□□□□ -1.71
SMC4-215ENST00000484799 ZNF284Q2VY69 593 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 ZNF672Q499Z4 452 aaPredicted RBP4.39□□□□□ -1.71
SMC4-215ENST00000484799 PLEKHO1Q53GL0 409 aaPredicted RBP4.39□□□□□ -1.71
SMC4-215ENST00000484799 C9orf57Q5W0N0 161 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 SYT13Q7L8C5 426 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 GHDCQ8N2G8 530 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 TEX45Q8NA69 505 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 OR1N1Q8NGS0 311 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 OR6Y1Q8NGX8 325 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 ATOH1Q92858 354 aaPredicted RBP4.39□□□□□ -1.71
SMC4-215ENST00000484799 SUFUQ9UMX1 484 aa4.39□□□□□ -1.71
SMC4-215ENST00000484799 IGHV4-28A0A0C4DH34 117 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 CLGNO14967 610 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 BUB3O43684 328 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 HBP1O60381 514 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 LYL1P12980 280 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 RPL3P39023 403 aaKnown RBP4.38□□□□□ -1.71
SMC4-215ENST00000484799 AARSP49588 968 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMC4-215ENST00000484799 ACSM2AQ08AH3 577 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms