RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 NUP205Q92621 2012 aa11.94□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ATXN2Q99700 1313 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RALGAPA1Q6GYQ0 2036 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CHD5Q8TDI0 1954 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 BCLAF3A2AJT9 711 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 KRIT1O00522 736 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PSTPIP1O43586 416 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 BUB1BO60566 1050 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PRAMEF11O60813 436 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 GSRP00390 522 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 IGLV3-19P01714 112 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CD48P09326 243 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 GNSP15586 552 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PTGER3P43115 390 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CCNHP51946 323 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ZNF235Q14590 738 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CCDC6Q16204 474 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CSRP2Q16527 193 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ATP13A4Q4VNC1 1196 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ANKRD20A8PQ5CZ79 823 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CFAP58Q5T655 872 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 LRRC38Q5VT99 294 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 C11orf63Q6NUN7 778 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 DPY19L3Q6ZPD9 716 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CCDC50Q8IVM0 306 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 NPWQ8N729 165 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TMIEQ8NEW7 156 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CADM4Q8NFZ8 388 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 OR6K2Q8NGY2 324 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 DESI2Q9BSY9 194 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TSGA10Q9BZW7 698 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 MIR1-1HGQ9H1L0 117 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PCED1AQ9H1Q7 454 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 NEUROG2Q9H2A3 272 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 VPS45Q9NRW7 570 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SUSD2Q9UGT4 822 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 IPO11Q9UI26 975 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PPM1HQ9ULR3 514 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ACTL7AQ9Y615 435 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CEP192Q8TEP8 1941 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 FRYLO94915 3013 aa11.93□□□□□ -0.5
CDK5RAP2-217ENST00000484546 MACROD2A1Z1Q3 448 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 J3KR12 359 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 KHNYNO15037 678 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ARHGAP6O43182 974 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SLC7A4O43246 635 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 LEFTY1O75610 366 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 FSBPO95073 299 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 POP4O95707 220 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CFIP05156 583 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PTMAP06454 111 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 KDELR1P24390 212 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ACSL1P33121 698 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CETN2P41208 172 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RENBPP51606 427 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 IL10RBQ08334 325 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RFTN1Q14699 578 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 AASDHQ4L235 1098 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PLA2G2CQ5R387 149 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TMCO4Q5TGY1 634 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 DCAF12L1Q5VU92 463 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 FBXL19Q6PCT2 694 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PRR23CQ6ZRP0 262 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RFX6Q8HWS3 928 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SYT12Q8IV01 421 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SYCE1Q8N0S2 351 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 AADATQ8N5Z0 425 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 NETO2Q8NC67 525 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CHST14Q8NCH0 376 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TSC1Q92574 1164 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 LRIG1Q96JA1 1093 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 NUSAP1Q9BXS6 441 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 OSBPL1AQ9BXW6 950 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 KLC2Q9H0B6 622 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 SMOC1Q9H4F8 434 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 MFHAS1Q9Y4C4 1052 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ALG6Q9Y672 507 aa11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3DA0A087WVF3 549 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3IA0A087WXS9 549 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3EA0A087X179 549 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3KA0A087X1G2 549 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3FA6NER0 549 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 BTNL10A8MVZ5 291 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3LB9A6J9 549 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 APOL1O14791 398 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 MFSD11O43934 449 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 CTSLP07711 333 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 TBC1D3HP0C7X1 549 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ZFXP17010 805 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 MX2P20592 715 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 XPAP23025 273 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ITPKAP23677 461 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 HOXD12P35452 270 aa11.91□□□□□ -0.5
CDK5RAP2-217ENST00000484546 ARSEP51690 589 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms