RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PARD6AQ9NPB6 346 aa16.16■□□□□ 0.18
UPF3A-208ENST00000484246 VPS45Q9NRW7 570 aa16.16■□□□□ 0.18
UPF3A-208ENST00000484246 KLHL11Q9NVR0 708 aa16.16■□□□□ 0.18
UPF3A-208ENST00000484246 LHX3Q9UBR4 397 aa16.16■□□□□ 0.18
UPF3A-208ENST00000484246 IL36AQ9UHA7 158 aa16.16■□□□□ 0.18
UPF3A-208ENST00000484246 IPO11Q9UI26 975 aaKnown RBP16.16■□□□□ 0.18
UPF3A-208ENST00000484246 ZFHX2Q9C0A1 2572 aaPredicted RBP16.16■□□□□ 0.18
UPF3A-208ENST00000484246 A0A1W2PP55 124 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 LRRD1A4D1F6 860 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 METTL12A8MUP2 240 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 J3KR12 359 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 PEX11BO96011 259 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 ACSL1P33121 698 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 DHPSP49366 369 aaPredicted RBP16.15■□□□□ 0.18
UPF3A-208ENST00000484246 ADPRHP54922 357 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 CYTH1Q15438 398 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 AGBL4Q5VU57 503 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 RABEPKQ7Z6M1 372 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 KIAA1328Q86T90 577 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 ZNF354CQ86Y25 554 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 SYT12Q8IV01 421 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 HDDC3Q8N4P3 179 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 LRRC57Q8N9N7 239 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 HSPA12BQ96MM6 686 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 RNF157Q96PX1 679 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 OMDQ99983 421 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 GPR174Q9BXC1 333 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 OSBPL1AQ9BXW6 950 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 HDAC8Q9BY41 377 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 TM6SF2Q9BZW4 377 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 ARRDC1-AS1Q9H2J1 176 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 SP110Q9HB58 689 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 SEMA4GQ9NTN9 838 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 EVLQ9UI08 416 aaPredicted RBP16.15■□□□□ 0.18
UPF3A-208ENST00000484246 PILRBQ9UKJ0 227 aa16.15■□□□□ 0.18
UPF3A-208ENST00000484246 GVINP1Q7Z2Y8 2422 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 DFFAO00273 331 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 MFSD11O43934 449 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 MAFKO60675 156 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 RNASEH2AO75792 299 aaKnown RBP16.14■□□□□ 0.17
UPF3A-208ENST00000484246 POP4O95707 220 aaKnown RBP16.14■□□□□ 0.17
UPF3A-208ENST00000484246 IGSF6O95976 241 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 KRT1P04264 644 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 ZNF806P0C7X5 589 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 ITGB7P26010 798 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 CSNK1DP48730 415 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 METAP1P53582 386 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 CREB5Q02930 508 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 CCDC15Q0P6D6 951 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 KIF5AQ12840 1032 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 SYCP2LQ5T4T6 812 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 PIP5KL1Q5T9C9 394 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 SLC9A4Q6AI14 798 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 TP53INP2Q8IXH6 220 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 KATNAL2Q8IYT4 538 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 DCLK2Q8N568 766 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 ATPAF2Q8N5M1 289 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 OR2T34Q8NGX1 318 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 PPP1R16AQ96I34 528 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 PSKH2Q96QS6 385 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 DESI2Q9BSY9 194 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 NEUROG2Q9H2A3 272 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 HECAQ9UBI9 543 aaPredicted RBP16.14■□□□□ 0.17
UPF3A-208ENST00000484246 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.14■□□□□ 0.17
UPF3A-208ENST00000484246 HYOU1Q9Y4L1 999 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 ADGRG1Q9Y653 693 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 DUSP10Q9Y6W6 482 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 USP34Q70CQ2 3546 aa16.14■□□□□ 0.17
UPF3A-208ENST00000484246 GRID2IPA4D2P6 1211 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 LRRC72A6NJI9 287 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 PLRG1O43660 514 aaKnown RBP16.13■□□□□ 0.17
UPF3A-208ENST00000484246 BNIP3LO60238 219 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 LEFTY1O75610 366 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 MX2P20592 715 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 CTNNA1P35221 906 aaKnown RBP16.13■□□□□ 0.17
UPF3A-208ENST00000484246 HSPA9P38646 679 aaKnown RBP16.13■□□□□ 0.17
UPF3A-208ENST00000484246 CCR5P51681 352 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 RHOAP61586 193 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 SPEM2Q0P670 501 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 CNTN1Q12860 1018 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 GRM3Q14832 879 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 IFI16Q16666 785 aaKnown RBP16.13■□□□□ 0.17
UPF3A-208ENST00000484246 MYLK3Q32MK0 819 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 ARSIQ5FYB1 569 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 WDR45BQ5MNZ6 344 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 LEKR1Q6ZMV7 388 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 ARHGAP36Q6ZRI8 547 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 ZNF662Q6ZS27 426 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 FAM124AQ86V42 546 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 LRRC8AQ8IWT6 810 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 GRIN3AQ8TCU5 1115 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 ARRDC3Q96B67 414 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 TSGA13Q96PP4 275 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 HINFPQ9BQA5 517 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 CPEB1Q9BZB8 566 aaKnown RBP16.13■□□□□ 0.17
UPF3A-208ENST00000484246 GOLPH3Q9H4A6 298 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 C6orf106Q9H6K1 298 aaPredicted RBP16.13■□□□□ 0.17
UPF3A-208ENST00000484246 PREBQ9HCU5 417 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 SUSD2Q9UGT4 822 aa16.13■□□□□ 0.17
UPF3A-208ENST00000484246 SEPT3Q9UH03 358 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms