RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SLC6A4P31645 630 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 L1CAMP32004 1257 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 CCR3P51677 355 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ARL4CP56559 192 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ZNF844Q08AG5 666 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 SLC29A2Q14542 456 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 GEN1Q17RS7 908 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 RAB6CQ53S08 254 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 DGKKQ5KSL6 1271 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 FYB2Q5VWT5 728 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 EGFLAMQ63HQ2 1017 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 NADSYN1Q6IA69 706 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 HIBCHQ6NVY1 386 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 PRR23BQ6ZRT6 265 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 CYP4V2Q6ZWL3 525 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 HTR3DQ70Z44 454 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 BEND5Q7L4P6 421 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ZC3H18Q86VM9 953 aaKnown RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ARHGAP18Q8N392 663 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 SPEM1Q8N4L4 309 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 PLD5Q8N7P1 536 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 TXNDC5Q8NBS9 432 aaKnown RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 DQX1Q8TE96 717 aaKnown RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 SORCS1Q8WY21 1168 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 RNF34Q969K3 372 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 NT5C3BQ969T7 300 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 NTAN1Q96AB6 310 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ZBTB9Q96C00 473 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 PGAP3Q96FM1 320 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 MSANTD3Q96H12 275 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 FRMD8Q9BZ67 464 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ROPN1BQ9BZX4 212 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 PHACTR1Q9C0D0 580 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 KLC2Q9H0B6 622 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 RAB6CQ9H0N0 254 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 SMOC1Q9H4F8 434 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 WDCPQ9H6R7 721 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ROPN1Q9HAT0 212 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ABCC13Q9NSE7 274 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 DDIT4Q9NX09 232 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 CLIC5Q9NZA1 410 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 SAE1Q9UBE0 346 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 LSM7Q9UK45 103 aaKnown RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 RAD54BQ9Y620 910 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 CEP192Q8TEP8 1941 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 SPEGQ15772 3267 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 EP300Q09472 2414 aaPredicted RBP7.09□□□□□ -1.28
BRCA1-216ENST00000484087 RIF1Q5UIP0 2472 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 THADAQ6YHU6 1953 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 FAM186AA6NE01 2351 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 BCLAF3A2AJT9 711 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 WASH3PC4AMC7 463 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 EEF2KO00418 725 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 SLC9A3R1O14745 358 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 RASGRF2O14827 1237 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 PPP1R12AO14974 1030 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 EIF3HO15372 352 aaKnown RBP eCLIP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 RGS16O15492 202 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 KCNN4O15554 427 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 HOXC11O43248 304 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ADAM23O75077 832 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 TTC4O95801 387 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ZSCAN5DPP0CG00 497 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ETS1P14921 441 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 PECAM1P16284 738 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 NR1D1P20393 614 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 DRD1P21728 446 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 IL4RP24394 825 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 LMAN1P49257 510 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 IRAK1P51617 712 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ATXN1P54253 815 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 MLLT6P55198 1093 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 BASP1P80723 227 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 GAD2Q05329 585 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 DMC1Q14565 340 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 HIF1AQ16665 826 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 CA9Q16790 459 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 RNASEH2BQ5TBB1 312 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 OTUD1Q5VV17 481 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 KCTD16Q68DU8 428 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ANO7Q6IWH7 933 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 LEKR1Q6ZMV7 388 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ZNF771Q7L3S4 317 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 CIR1Q86X95 450 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 RELL1Q8IUW5 271 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ABCA7Q8IZY2 2146 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 CCDC185Q8N715 623 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ZNF366Q8N895 744 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 FAM71DQ8N9W8 422 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 TERB1Q8NA31 727 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 IL17RCQ8NAC3 791 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 SUMF1Q8NBK3 374 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ZBTB44Q8NCP5 570 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 OR2W6PQ8NHA6 318 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 PCDH19Q8TAB3 1148 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 USP33Q8TEY7 942 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 RNF139Q8WU17 664 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 RLN3Q8WXF3 142 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ARL8AQ96BM9 186 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms