RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 HAUS2Q9NVX0 235 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 SIRPGQ9P1W8 387 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 STOML2Q9UJZ1 356 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 INSL5Q9Y5Q6 135 aa13.43□□□□□ -0.26
CPNE1-225ENST00000483495 PRRG1O14668 218 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 SIN3BO75182 1162 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 GLRA3O75311 464 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 CLDN11O75508 207 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 GSTA1P08263 222 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 CORO1AP31146 461 aaKnown RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ELF1P32519 619 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 MAGEA9P43362 315 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ARCN1P48444 511 aaKnown RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 PDE1BQ01064 536 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ACTN3Q08043 901 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 MSLNQ13421 630 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 IHHQ14623 411 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 LBRQ14739 615 aaKnown RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 POU6F1Q14863 301 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 TAF12Q16514 161 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ALG1LQ6GMV1 187 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 FSTL4Q6MZW2 842 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 CHST9Q7L1S5 443 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 NECAB2Q7Z6G3 386 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 TMEM150AQ86TG1 271 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 DENND1CQ8IV53 801 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 CFAP52Q8N1V2 620 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 PGBD5Q8N414 524 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ARMC2Q8NEN0 867 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ZNF398Q8TD17 642 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ATP2A3Q93084 1043 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 PRICKLE1Q96MT3 831 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 RANBP9Q96S59 729 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 YME1L1Q96TA2 773 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 PRKD2Q9BZL6 878 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ABCF3Q9NUQ8 709 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 DCDC2Q9UHG0 476 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ZFP37Q9Y6Q3 630 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 C2orf78A6NCI8 922 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 TEX28O15482 410 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 TIMM44O43615 452 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 TGDSO95455 350 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 LATS1O95835 1130 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 F11P03951 625 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 LINC00271P0C7V0 271 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ACRP10323 421 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 BGNP21810 368 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 HOXD9P28356 352 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 HADHAP40939 763 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 CD86P42081 329 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 SERPINB8P50452 374 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 CSRP3P50461 194 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 EPHB3P54753 998 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 MAXP61244 160 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 DSC2Q02487 901 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 GNA12Q03113 381 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 CCDC15Q0P6D6 951 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 GALNTL6Q49A17 601 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ADGRF1Q5T601 910 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 DCLK2Q8N568 766 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 GBP7Q8N8V2 638 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 C10orf82Q8WW14 230 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 AUTS2Q8WXX7 1259 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 RMDN2Q96LZ7 410 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 TSSK1BQ9BXA7 367 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ZBP1Q9H171 429 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 ALG13Q9NP73 1137 aaKnown RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 IL23AQ9NPF7 189 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 GKN1Q9NS71 199 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 IARS2Q9NSE4 1012 aaKnown RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 AGO1Q9UL18 857 aaKnown RBP13.42□□□□□ -0.26
CPNE1-225ENST00000483495 SLC12A4Q9UP95 1085 aa13.42□□□□□ -0.26
CPNE1-225ENST00000483495 LOC285095A0A1B0GVY8 99 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 OLFM2O95897 454 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 GSRP00390 522 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 BPGMP07738 259 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 ARNTP27540 789 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 TYK2P29597 1187 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 CHRNA4P43681 627 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-225ENST00000483495 SMAD1Q15797 465 aaKnown RBP13.41□□□□□ -0.26
CPNE1-225ENST00000483495 KIAA0930Q6ICG6 404 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-225ENST00000483495 SETD3Q86TU7 594 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-225ENST00000483495 ZNF354CQ86Y25 554 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 ZFRQ96KR1 1074 aaKnown RBP13.41□□□□□ -0.26
CPNE1-225ENST00000483495 POLR1EQ9GZS1 481 aaKnown RBP13.41□□□□□ -0.26
CPNE1-225ENST00000483495 SNX15Q9NRS6 342 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 EMCNQ9ULC0 261 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 PCDHB12Q9Y5F1 795 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 USH1CQ9Y6N9 552 aa13.41□□□□□ -0.26
CPNE1-225ENST00000483495 A0A0D9SEW6 157 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 ILVBLA1L0T0 632 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 HEATR9A2RTY3 570 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 PLIN3O60664 434 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 PAPSS2O95340 614 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 TOP3BO95985 862 aaKnown RBP13.4□□□□□ -0.26
CPNE1-225ENST00000483495 CTSAP10619 480 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 PAMP19021 973 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 SCTRP47872 440 aa13.4□□□□□ -0.26
CPNE1-225ENST00000483495 SERPINH1P50454 418 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms