RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 KCTD6Q8NC69 237 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SLC35B2Q8TB61 432 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 DIS3LQ8TF46 1054 aaKnown RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 CHTF18Q8WVB6 975 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 RNF141Q8WVD5 230 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 TRAPPC12Q8WVT3 735 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 RSAD2Q8WXG1 361 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 RBM15Q96T37 977 aaKnown RBP eCLIP7.95□□□□□ -1.144e-7■■□□□ 11.6
SNX13-208ENST00000482558 LGR4Q9BXB1 951 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 KRTAP9-3Q9BYQ3 159 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 TRIM7Q9C029 511 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 GBA2Q9HCG7 927 aaPredicted RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 NKIRAS2Q9NYR9 191 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SLC24A2Q9UI40 661 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 MAGED1Q9Y5V3 778 aaPredicted RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 FAM169AQ9Y6X4 670 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 ANK1P16157 1881 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 TOR1BO14657 336 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 PRPSAP2O60256 369 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 PEX10O60683 326 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 LRCH4O75427 683 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ENDOD1O94919 500 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 TRUB2O95900 331 aaKnown RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 EOMESO95936 686 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 SHBGP04278 402 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 IQCF3P0C7M6 154 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 TGM2P21980 687 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 FGFR4P22455 802 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ELF1P32519 619 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 HOXD12P35452 270 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ARSEP51690 589 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ARL4CP56559 192 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 INHBEP58166 350 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 MAP4K2Q12851 820 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ITIH4Q14624 930 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 TAF12Q16514 161 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 P3H1Q32P28 736 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 OLFML2BQ68BL8 750 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 POMZP3Q6PJE2 187 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 CCDC121Q6ZUS5 278 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 BZW1Q7L1Q6 419 aaKnown RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 CATSPER4Q7RTX7 472 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 TADA2BQ86TJ2 420 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 TMEM110Q86TL2 294 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 PSTKQ8IV42 348 aaKnown RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 SPACA3Q8IXA5 215 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 HACE1Q8IYU2 909 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 MIER2Q8N344 545 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ZNF513Q8N8E2 541 aaPredicted RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 LSMEM1Q8N8F7 131 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 BRI3BPQ8WY22 251 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ATG4AQ8WYN0 398 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 RAPGEF5Q92565 580 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 APBB2Q92870 758 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ARHGEF2Q92974 986 aaKnown RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 GRAMD1AQ96CP6 724 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 CABS1Q96KC9 395 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 COX4I2Q96KJ9 171 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 SNX27Q96L92 541 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 MRGPRX3Q96LB0 322 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 HSFY1Q96LI6 401 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 FERMT1Q9BQL6 677 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 TRIM6Q9C030 488 aaPredicted RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 ELOVL4Q9GZR5 314 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 ADAMTS10Q9H324 1103 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 CERS4Q9HA82 394 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 PPANQ9NQ55 473 aaKnown RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 TMEM51Q9NW97 253 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 NKIRAS1Q9NYS0 192 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 NINJ2Q9NZG7 142 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 DNPEPQ9ULA0 475 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 USP18Q9UMW8 372 aa7.94□□□□□ -1.14
SNX13-208ENST00000482558 SMG5Q9UPR3 1016 aaKnown RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 R3HDM2Q9Y2K5 976 aaKnown RBP7.94□□□□□ -1.14
SNX13-208ENST00000482558 KAT6AQ92794 2004 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 A0A087WV62 115 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 MANSC4A6NHS7 340 aaPredicted RBP7.93□□□□□ -1.14
SNX13-208ENST00000482558 C3orf70A6NLC5 250 aaPredicted RBP7.93□□□□□ -1.14
SNX13-208ENST00000482558 C2CD4BA6NLJ0 364 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 GOLGA8SH3BPF8 625 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 SGK1O00141 431 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 MDM4O15151 490 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 TP73O15350 636 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 PPM1BO75688 479 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 TUSC2O75896 110 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 ACSL3O95573 720 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 CALCAP01258 141 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 VTNP04004 478 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 GSTA2P09210 222 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 ZNF286BP0CG31 522 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 GHRP10912 638 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 DARSP14868 501 aaKnown RBP7.93□□□□□ -1.14
SNX13-208ENST00000482558 KCNE1P15382 129 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 CHN1P15882 459 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 PDGFRAP16234 1089 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 YY1P25490 414 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 SDC4P31431 198 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 GJC1P36383 396 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 PTPN9P43378 593 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 NR2C2P49116 596 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms