RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ADCY4Q8NFM4 1077 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 GIPC3Q8TF64 312 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 DNAI2Q9GZS0 605 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 NXF3Q9H4D5 531 aaKnown RBP12.88□□□□□ -0.35
VPS52-218ENST00000482399 SETD4Q9NVD3 440 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 FAM72CH0Y354 149 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 BOLA2-SMG1P6H3BVE0 249 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 C1QAP02745 245 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 MPOP05164 745 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 PFKMP08237 780 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 USP17L7P0C7H9 530 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 OGFRL1Q5TC84 451 aaPredicted RBP12.88□□□□□ -0.35
VPS52-218ENST00000482399 FAM72AQ5TYM5 149 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 FAM91A1Q658Y4 838 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 ARHGAP17Q68EM7 881 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 FAM72DQ6L9T8 149 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 FAM72BQ86X60 149 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 PGAM4Q8N0Y7 254 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 VPS50Q96JG6 964 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 STRCQ7RTU9 1775 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 C9IYK1 514 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 ANGPT2O15123 496 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 FAM189A1O60320 539 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 TSPAN3O60637 253 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 YBX3P16989 372 aaKnown RBP eCLIP12.88□□□□□ -0.357e-11■■□□□ 13.3
VPS52-218ENST00000482399 YWHAQP27348 245 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 MAP4P27816 1152 aaKnown RBP12.88□□□□□ -0.35
VPS52-218ENST00000482399 SLC5A2P31639 672 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 HARS2P49590 506 aaKnown RBP12.88□□□□□ -0.35
VPS52-218ENST00000482399 SLC5A3P53794 718 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 GJA9P57773 515 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 FBXO47Q5MNV8 452 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 LDLRAP1Q5SW96 308 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 ESRP1Q6NXG1 681 aaKnown RBP12.88□□□□□ -0.35
VPS52-218ENST00000482399 ARMCX2Q7L311 632 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 ADGRG6Q86SQ4 1221 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 DHFR2Q86XF0 187 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 SPPL2CQ8IUH8 684 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 PARP8Q8N3A8 854 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 CBR4Q8N4T8 237 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 CXorf38Q8TB03 319 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 HAPLN3Q96S86 360 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 RAB26Q9ULW5 256 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 CRYL1Q9Y2S2 319 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 NUP205Q92621 2012 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 A0A0J9YVX5 310 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 NCF1BA6NI72 391 aaPredicted RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 NCF1CA8MVU1 366 aaPredicted RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 MATN2O00339 956 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 TADA2AO75478 443 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 GSRP00390 522 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 IL1BP01584 269 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 SMIM18P0DKX4 95 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 SETSIPP0DME0 302 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 NCF1P14598 390 aaPredicted RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 CES1P23141 567 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 ENPEPQ07075 957 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 NIPAL4Q0D2K0 466 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 ARL13BQ3SXY8 428 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 NOMO2Q5JPE7 1267 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 XKR5Q6UX68 686 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 EXOC8Q8IYI6 725 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 CANT1Q8WVQ1 401 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 SLC45A3Q96JT2 553 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 SLC29A1Q99808 456 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 CCDC28BQ9BUN5 200 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 EIF2AQ9BY44 585 aaKnown RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 ULBP1Q9BZM6 244 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 TRIM38O00635 465 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 DLX3O60479 287 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 RECQL4O94761 1208 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 BAIAP3O94812 1187 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 CDK4P11802 303 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 PTPN3P26045 913 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 NSUN2Q08J23 767 aaKnown RBP eCLIP12.87□□□□□ -0.35
VPS52-218ENST00000482399 MGAT5BQ3V5L5 792 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 TWF2Q6IBS0 349 aaKnown RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 FASTKD5Q7L8L6 764 aaKnown RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 DNAJB14Q8TBM8 379 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 MAGEE2Q8TD90 523 aaPredicted RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 TUBGCP3Q96CW5 907 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 PABPC5Q96DU9 382 aaKnown RBP12.87□□□□□ -0.35
VPS52-218ENST00000482399 WDCPQ9H6R7 721 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 CROTQ9UKG9 612 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 C1orf232A0A0U1RR37 186 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 G3V2L1 256 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 ENDOD1O94919 500 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 FBXO21O94952 628 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 ZNF23P17027 643 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 IL10P22301 178 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 MATKP42679 507 aa12.87□□□□□ -0.35
VPS52-218ENST00000482399 CHRNA4P43681 627 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms