RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 CCDC15Q0P6D6 951 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
HSPG2-210ENST00000481644 SERINC3Q13530 473 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 RFX8Q6ZV50 586 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 RYBPQ8N488 228 aaPredicted RBP19.07■□□□□ 0.64
HSPG2-210ENST00000481644 NIPA2Q8N8Q9 360 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 ARRDC3Q96B67 414 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 PPP1R16AQ96I34 528 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 KLC2Q9H0B6 622 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 ZDHHC6Q9H6R6 413 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 ZWILCHQ9H900 591 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 DNAAF2Q9NVR5 837 aaKnown RBP19.07■□□□□ 0.64
HSPG2-210ENST00000481644 HECAQ9UBI9 543 aaPredicted RBP19.07■□□□□ 0.64
HSPG2-210ENST00000481644 TPX2Q9ULW0 747 aaKnown RBP19.07■□□□□ 0.64
HSPG2-210ENST00000481644 CACNA1AO00555 2505 aa19.07■□□□□ 0.64
HSPG2-210ENST00000481644 TP53BP1Q12888 1972 aaPredicted RBP19.06■□□□□ 0.64
HSPG2-210ENST00000481644 SSU72P8A0A1W2PR75 194 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 C10orf142B7Z368 130 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 RNF103O00237 685 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 TCF4P15884 667 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 IL1R2P27930 398 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 ZNF135P52742 658 aaPredicted RBP19.06■□□□□ 0.64
HSPG2-210ENST00000481644 ADKP55263 362 aaKnown RBP19.06■□□□□ 0.64
HSPG2-210ENST00000481644 SNRPD1P62314 119 aaKnown RBP19.06■□□□□ 0.64
HSPG2-210ENST00000481644 BNC1Q01954 994 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 SMTNL2Q2TAL5 461 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 KCNT1Q5JUK3 1230 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 PIP5KL1Q5T9C9 394 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 SARM1Q6SZW1 724 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 IL27RAQ6UWB1 636 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 ADAT2Q7Z6V5 191 aaKnown RBP19.06■□□□□ 0.64
HSPG2-210ENST00000481644 PLPP6Q8IY26 295 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 ZNF564Q8TBZ8 553 aaPredicted RBP19.06■□□□□ 0.64
HSPG2-210ENST00000481644 CASKIN2Q8WXE0 1202 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 CELF6Q96J87 481 aaKnown RBP19.06■□□□□ 0.64
HSPG2-210ENST00000481644 SLC6A18Q96N87 628 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 TRIM5Q9C035 493 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 LRRC19Q9H756 370 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 EBF2Q9HAK2 575 aa19.06■□□□□ 0.64
HSPG2-210ENST00000481644 TMEM131Q92545 1883 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 MYO1FO00160 1098 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 AKR1B10O60218 316 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 TMCC1O94876 653 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 KCNK5O95279 499 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 CER1O95813 267 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 GSRP00390 522 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 ERCC2P18074 760 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 NOVA1P51513 510 aaKnown RBP19.05■□□□□ 0.64
HSPG2-210ENST00000481644 NDST2P52849 883 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 TAS2R38P59533 333 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 RACK1P63244 317 aaKnown RBP19.05■□□□□ 0.64
HSPG2-210ENST00000481644 ASTE1Q2TB18 679 aaPredicted RBP19.05■□□□□ 0.64
HSPG2-210ENST00000481644 BOLA3Q53S33 107 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 PSAPL1Q6NUJ1 521 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 LAYNQ6UX15 382 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 ERN2Q76MJ5 926 aaKnown RBP19.05■□□□□ 0.64
HSPG2-210ENST00000481644 CNGA4Q8IV77 575 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 OR2AP1Q8NGE2 309 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 OR6K2Q8NGY2 324 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 CTNNBL1Q8WYA6 563 aaPredicted RBP19.05■□□□□ 0.64
HSPG2-210ENST00000481644 HSPH1Q92598 858 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 HDAC8Q9BY41 377 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 GAREM1Q9H706 876 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 PREBQ9HCU5 417 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 AASDHPPTQ9NRN7 309 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.05■□□□□ 0.64
HSPG2-210ENST00000481644 CWC15Q9P013 229 aaKnown RBP19.05■□□□□ 0.64
HSPG2-210ENST00000481644 CTTNBP2NLQ9P2B4 639 aa19.05■□□□□ 0.64
HSPG2-210ENST00000481644 ARHGAP42A6NI28 874 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 H3BRJ5 948 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 KRIT1O00522 736 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 LATO43561 262 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 GJB3O75712 270 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 H2AFZP0C0S5 128 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 RARAP10276 462 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 CSRP1P21291 193 aaKnown RBP19.04■□□□□ 0.64
HSPG2-210ENST00000481644 ITGB7P26010 798 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 MAT2AP31153 395 aaKnown RBP19.04■□□□□ 0.64
HSPG2-210ENST00000481644 ARL4AP40617 200 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 HCAR3P49019 387 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 DPYSL2Q16555 572 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 INO80DQ53TQ3 878 aaPredicted RBP19.04■□□□□ 0.64
HSPG2-210ENST00000481644 H2AFVQ71UI9 128 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 PRPF39Q86UA1 669 aaKnown RBP19.04■□□□□ 0.64
HSPG2-210ENST00000481644 TRIM69Q86WT6 500 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 DEFB124Q8NES8 71 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 TEKT4Q8WW24 435 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 SERAC1Q96JX3 654 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 CCDC42Q96M95 316 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 CHP1Q99653 195 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 PACSIN1Q9BY11 444 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 SLC39A8Q9C0K1 460 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 UVRAGQ9P2Y5 699 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 UBA2Q9UBT2 640 aaPredicted RBP19.04■□□□□ 0.64
HSPG2-210ENST00000481644 ANKRD6Q9Y2G4 727 aa19.04■□□□□ 0.64
HSPG2-210ENST00000481644 UPK3BL1B0FP48 263 aa19.03■□□□□ 0.64
HSPG2-210ENST00000481644 AKR1B15C9JRZ8 316 aaPredicted RBP19.03■□□□□ 0.64
HSPG2-210ENST00000481644 UPK3BL2E5RIL1 263 aa19.03■□□□□ 0.64
HSPG2-210ENST00000481644 RNGTTO60942 597 aaKnown RBP19.03■□□□□ 0.64
HSPG2-210ENST00000481644 GKP32189 559 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms