RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 LRIG2O94898 1065 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 PLEKP08567 350 aaPredicted RBP18.92■□□□□ 0.62
CLK1-211ENST00000481641 GKP32189 559 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 CCNHP51946 323 aaPredicted RBP18.92■□□□□ 0.62
CLK1-211ENST00000481641 CLDN2P57739 230 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 NRG1Q02297 640 aaPredicted RBP18.92■□□□□ 0.62
CLK1-211ENST00000481641 SLC20A2Q08357 652 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 SMAD1Q15797 465 aaKnown RBP18.92■□□□□ 0.62
CLK1-211ENST00000481641 STRADAQ7RTN6 431 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 PHF13Q86YI8 300 aaPredicted RBP18.92■□□□□ 0.62
CLK1-211ENST00000481641 PYROXD2Q8N2H3 581 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 GALNT15Q8N3T1 639 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 PCDH20Q8N6Y1 951 aaKnown RBP18.92■□□□□ 0.62
CLK1-211ENST00000481641 TMEM145Q8NBT3 493 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 ANKRD20A12PQ8NF67 263 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 OR6K2Q8NGY2 324 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 ARHGEF2Q92974 986 aaKnown RBP18.92■□□□□ 0.62
CLK1-211ENST00000481641 HEPHQ9BQS7 1158 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 HDAC8Q9BY41 377 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 CEP44Q9C0F1 390 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 ZDHHC6Q9H6R6 413 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 DAAM1Q9Y4D1 1078 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 APC2O95996 2303 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 CHD5Q8TDI0 1954 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 TRABD2BA6NFA1 517 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 THEGLP0DJG4 465 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 ATP1A3P13637 1013 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 RHOQP17081 205 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 GPD1P21695 349 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 OVGP1Q12889 678 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 CAMK2BQ13554 666 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 SFMBT2Q5VUG0 894 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 NEK5Q6P3R8 708 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 MON1BQ7L1V2 547 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 OXR1Q8N573 874 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 NETO2Q8NC67 525 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 TBC1D31Q96DN5 1066 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 PPP1R16AQ96I34 528 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 ERGIC2Q96RQ1 377 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 AGPAT1Q99943 283 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 TMEM248Q9NWD8 314 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 HECAQ9UBI9 543 aaPredicted RBP18.91■□□□□ 0.62
CLK1-211ENST00000481641 ACACAQ13085 2346 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 LAMA5O15230 3695 aa18.91■□□□□ 0.62
CLK1-211ENST00000481641 LRRC10BA6NIK2 292 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 CCP110O43303 1012 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 MAGEC1O60732 1142 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 CALB1P05937 261 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 ADRB3P13945 408 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 L1CAMP32004 1257 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 MAPKAPK2P49137 400 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 ACADVLP49748 655 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 NEK3P51956 506 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 GSCP56915 257 aaPredicted RBP18.9■□□□□ 0.62
CLK1-211ENST00000481641 CYP4F3Q08477 520 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 CCDC15Q0P6D6 951 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 MAPK8IP2Q13387 824 aaPredicted RBP18.9■□□□□ 0.62
CLK1-211ENST00000481641 FGL2Q14314 439 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 C19orf48Q6RUI8 117 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 GCNT7Q6ZNI0 430 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 PARS2Q7L3T8 475 aaKnown RBP18.9■□□□□ 0.62
CLK1-211ENST00000481641 RYBPQ8N488 228 aaPredicted RBP18.9■□□□□ 0.62
CLK1-211ENST00000481641 AOPEPQ8N6M6 819 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 C3orf20Q8ND61 904 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 OR13H1Q8NG92 308 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 CALN1Q9BXU9 219 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 CELSR3Q9NYQ7 3312 aa18.9■□□□□ 0.62
CLK1-211ENST00000481641 TCRBV5S1A1TA0A578 114 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 SIGLEC16A6NMB1 481 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 RFPL3O75679 317 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 HNRNPA2B1P22626 353 aaKnown RBP18.89■□□□□ 0.61
CLK1-211ENST00000481641 ITGB7P26010 798 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 AKT2P31751 481 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 RPL7AP62424 266 aaKnown RBP18.89■□□□□ 0.61
CLK1-211ENST00000481641 TMEM259Q4ZIN3 620 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 CCDC183Q5T5S1 534 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 SCYL2Q6P3W7 929 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 FBXL19Q6PCT2 694 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 SLFN11Q7Z7L1 901 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 SLC25A45Q8N413 288 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 TSC1Q92574 1164 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 MCEEQ96PE7 176 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 KLC2Q9H0B6 622 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 UCKL1Q9NWZ5 548 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 LHX6Q9UPM6 363 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 RAXQ9Y2V3 346 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 PCDHGA1Q9Y5H4 931 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 FADS3Q9Y5Q0 445 aa18.89■□□□□ 0.61
CLK1-211ENST00000481641 GOLGA6L22H0YM25 854 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 TRIM38O00635 465 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 RAD51BO15315 384 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 TEX33O43247 280 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 RAMP2O60895 175 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 PAK4O96013 591 aaPredicted RBP18.88■□□□□ 0.61
CLK1-211ENST00000481641 ETFBP38117 255 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 TYRO3Q06418 890 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 POLD3Q15054 466 aaPredicted RBP18.88■□□□□ 0.61
CLK1-211ENST00000481641 ZNF542PQ5EBM4 170 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 ATXN7L2Q5T6C5 722 aaPredicted RBP18.88■□□□□ 0.61
CLK1-211ENST00000481641 DNAJC24Q6P3W2 148 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms