RNA–Protein interactions for RNA: ENST00000481180.5

CCDC18-209, Transcript of coiled-coil domain containing 18, human

TSL 5

Gene CCDC18, Length 1,751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC18-209	ENST00000481180	TSNARE1	Q96NA8	513 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	PRKD2	Q9BZL6	878 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	C20orf27	Q9GZN8	174 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	CD248	Q9HCU0	757 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	MARCO	Q9UEW3	520 aa	Predicted RBP	11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	MID2	Q9UJV3	735 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	TLK1	Q9UKI8	766 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	SLC39A10	Q9ULF5	831 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	DNAJC16	Q9Y2G8	782 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	SHROOM3	Q8TF72	1996 aa		11.91	□□□□□ -0.5
CCDC18-209	ENST00000481180	VWA8	A3KMH1	1905 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	ITM2A	O43736	263 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	CCDC22	O60826	627 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	PQBP1	O60828	265 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	LYPLA1	O75608	230 aa	Predicted RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	VAPB	O95292	243 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	APOA4	P06727	396 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	TACR2	P21452	398 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	SLC8A1	P32418	973 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	GMPR	P36959	345 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	PBX3	P40426	434 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	ARCN1	P48444	511 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	POLD2	P49005	469 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	MAPKAPK2	P49137	400 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	ABCE1	P61221	599 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	IRF9	Q00978	393 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	TNK2	Q07912	1038 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	ITK	Q08881	620 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	THOC5	Q13769	683 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	SEPT6	Q14141	434 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	DLG2	Q15700	870 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	PCSK7	Q16549	785 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	PARP15	Q460N3	678 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	HSF5	Q4G112	596 aa	Predicted RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	RAPH1	Q70E73	1250 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	ALYREF	Q86V81	257 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	WDR75	Q8IWA0	830 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	CRIPAK	Q8N1N5	446 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	TEX26	Q8N6G2	289 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	SH3TC2	Q8TF17	1288 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	SREK1	Q8WXA9	508 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	PABPC5	Q96DU9	382 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	PRR11	Q96HE9	360 aa	Predicted RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	RPRD1A	Q96P16	312 aa	Predicted RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	KLHL5	Q96PQ7	755 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	FAM167B	Q9BTA0	163 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	TBC1D10A	Q9BXI6	508 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	UBE2O	Q9C0C9	1292 aa	Known RBP	11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	UNC93B1	Q9H1C4	597 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	FAM96A	Q9H5X1	160 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	VPS45	Q9NRW7	570 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	ZNF358	Q9NW07	568 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180	NUP205	Q92621	2012 aa		11.9	□□□□□ -0.5
CCDC18-209	ENST00000481180		A8MUI8	341 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	TLR5	O60602	858 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	RAMP2	O60895	175 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	SIN3B	O75182	1162 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	H2AFY	O75367	372 aa	Known RBP	11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	CALB2	P22676	271 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	DNAJB1	P25685	340 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	CHRNA4	P43681	627 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	IL10RB	Q08334	325 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	USP10	Q14694	798 aa	Known RBP	11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	POLD3	Q15054	466 aa	Predicted RBP	11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	KDELC2	Q7Z4H8	507 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	LCA5	Q86VQ0	697 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	TMEM173	Q86WV6	379 aa	Predicted RBP	11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	SLC25A41	Q8N5S1	370 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	ACVR1C	Q8NER5	493 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	FBXO22	Q8NEZ5	403 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	PIWIL2	Q8TC59	973 aa	Known RBP	11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	PSMG2	Q969U7	264 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	SCLY	Q96I15	445 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	CEP295NL	Q96MC4	621 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	RANBP9	Q96S59	729 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	TTLL2	Q9BWV7	592 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	NMUR2	Q9GZQ4	415 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	STN1	Q9H668	368 aa	Known RBP	11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	CCSER2	Q9H7U1	834 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	TLE6	Q9H808	572 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	ARNT2	Q9HBZ2	717 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	ATP13A1	Q9HD20	1204 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	TREX1	Q9NSU2	369 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	ZNF212	Q9UDV6	495 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	SLC2A6	Q9UGQ3	507 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	CDY1	Q9Y6F8	540 aa		11.9	□□□□□ -0.51
CCDC18-209	ENST00000481180	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.89	□□□□□ -0.51
CCDC18-209	ENST00000481180	HEATR9	A2RTY3	570 aa		11.89	□□□□□ -0.51
CCDC18-209	ENST00000481180	TMEM114	B3SHH9	223 aa		11.89	□□□□□ -0.51
CCDC18-209	ENST00000481180		G3V2L1	256 aa		11.89	□□□□□ -0.51
CCDC18-209	ENST00000481180	AHSG	P02765	367 aa		11.89	□□□□□ -0.51
CCDC18-209	ENST00000481180	CXCL10	P02778	98 aa		11.89	□□□□□ -0.51
CCDC18-209	ENST00000481180	ESRRA	P11474	423 aa	Predicted RBP	11.89	□□□□□ -0.51
CCDC18-209	ENST00000481180	ATF6	P18850	670 aa		11.89	□□□□□ -0.51
CCDC18-209	ENST00000481180	CD86	P42081	329 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms