RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 PLEKHG6Q3KR16 790 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 ANKRD20A8PQ5CZ79 823 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 PITRM1Q5JRX3 1037 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 C6orf118Q5T5N4 469 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 LEKR1Q6ZMV7 388 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 NUDT18Q6ZVK8 323 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 SLCO6A1Q86UG4 719 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 NT5DC3Q86UY8 548 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 ADIPOR2Q86V24 386 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 PROSER1Q86XN7 944 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 ZNF354CQ86Y25 554 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 REXO1L1PQ8IX06 675 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 AHI1Q8N157 1196 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 HDDC3Q8N4P3 179 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 RNF10Q8N5U6 811 aaKnown RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 RTL3Q8N8U3 475 aaKnown RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 C1orf216Q8TAB5 229 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 DNASE2BQ8WZ79 361 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 CELF6Q96J87 481 aaKnown RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 CSPG4P5Q96PW8 444 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 FEM1AQ9BSK4 669 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 CATSPERBQ9H7T0 1116 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 ETNK2Q9NVF9 386 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 ELOVL2Q9NXB9 296 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 TOR4AQ9NXH8 423 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 WSB2Q9NYS7 404 aaPredicted RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 USP36Q9P275 1121 aaKnown RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 THAP10Q9P2Z0 257 aaPredicted RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 ZNF212Q9UDV6 495 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 VPS28Q9UK41 221 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 AMFRQ9UKV5 643 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 LHX6Q9UPM6 363 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 TBC1D30Q9Y2I9 924 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 GOLGA4Q13439 2230 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 CBX4O00257 560 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 FGF10O15520 208 aaPredicted RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 PSTPIP1O43586 416 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 SNAP91O60641 907 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 TRIM16O95361 564 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 FTH1P19P0C7X4 201 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 GLDCP23378 1020 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 IL4RP24394 825 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 PRKCHP24723 683 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 CD6P30203 668 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 ACVRL1P37023 503 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 HCAR3P49019 387 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 MAPKAPK2P49137 400 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 STK19P49842 368 aaPredicted RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 ATXN3P54252 364 aaPredicted RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 OXCT1P55809 520 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 DYNLT1P63172 113 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 DPYSQ14117 519 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 PDK2Q15119 407 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 TRIP6Q15654 476 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 FNDC3BQ53EP0 1204 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 LRRC38Q5VT99 294 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 KAZNQ674X7 775 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 MFSD7Q6UXD7 560 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 KIAA1324Q6UXG2 1013 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 ZNF662Q6ZS27 426 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 RABEPKQ7Z6M1 372 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 KIAA0907Q7Z7F0 614 aaPredicted RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 SETD3Q86TU7 594 aaPredicted RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 METTL3Q86U44 580 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 RFX6Q8HWS3 928 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 CCDC50Q8IVM0 306 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 NAXDQ8IW45 347 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 MAP7D3Q8IWC1 876 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 TP53INP2Q8IXH6 220 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 SYCE1Q8N0S2 351 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 C17orf53Q8N3J3 647 aaPredicted RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 NPWQ8N729 165 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 ZNF366Q8N895 744 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.25□□□□□ -0.93
VCP-206ENST00000480327 ZNF557Q8N988 423 aaPredicted RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 PCDH19Q8TAB3 1148 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 BAHD1Q8TBE0 780 aaPredicted RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 WFIKKN2Q8TEU8 576 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 UCMAQ8WVF2 138 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 ADAMTS14Q8WXS8 1223 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 TSC1Q92574 1164 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 ALG14Q96F25 216 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 TOE1Q96GM8 510 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 RPL10LQ96L21 214 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 PSMB7Q99436 277 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 NOL6Q9H6R4 1146 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 ITM2CQ9NQX7 267 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 DDX56Q9NY93 547 aaKnown RBP9.25□□□□□ -0.93
VCP-206ENST00000480327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.25□□□□□ -0.93
VCP-206ENST00000480327 GPSM3Q9Y4H4 160 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 PCDHA3Q9Y5H8 950 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 OR51B4Q9Y5P0 310 aa9.25□□□□□ -0.93
VCP-206ENST00000480327 SHROOM3Q8TF72 1996 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ILVBLA1L0T0 632 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 C3orf70A6NLC5 250 aaPredicted RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 WASH4PA8MWX3 477 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 RASA4BC9J798 803 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 DFFAO00273 331 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 RASA4O43374 803 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms