RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
SIK3-209ENST00000480222 MUC22E2RYF6 1773 aaPredicted RBP12.79□□□□□ -0.36
SIK3-209ENST00000480222 AP3B1O00203 1094 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 SNAP91O60641 907 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 TULP3O75386 442 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 TMCC1O94876 653 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 TMEM63AO94886 807 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 SUN1O94901 812 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 AP2A1O95782 977 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 CES1P23141 567 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 GLDCP23378 1020 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 MAPK8P45983 427 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 LMAN1P49257 510 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
SIK3-209ENST00000480222 GEMP55040 296 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
SIK3-209ENST00000480222 MPP3Q13368 585 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 GAB4Q2WGN9 574 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 FAXCQ5TGI0 409 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 FBXO38Q6PIJ6 1188 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 SUGP1Q8IWZ8 645 aaKnown RBP12.79□□□□□ -0.36
SIK3-209ENST00000480222 GSPT2Q8IYD1 628 aaKnown RBP12.79□□□□□ -0.36
SIK3-209ENST00000480222 APCDD1Q8J025 514 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 MCUQ8NE86 351 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 DNASE1L2Q92874 299 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 IMP4Q96G21 291 aaKnown RBP12.79□□□□□ -0.36
SIK3-209ENST00000480222 HINFPQ9BQA5 517 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 CEP44Q9C0F1 390 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 BRD9Q9H8M2 597 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 LRRC40Q9H9A6 602 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 XAB2Q9HCS7 855 aaKnown RBP12.79□□□□□ -0.36
SIK3-209ENST00000480222 ARFGAP3Q9NP61 516 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 NT5MQ9NPB1 228 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 TRPV5Q9NQA5 729 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 DEC1Q9P2X7 70 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 INTS6Q9UL03 887 aaKnown RBP12.79□□□□□ -0.36
SIK3-209ENST00000480222 MYOFQ9NZM1 2061 aa12.79□□□□□ -0.36
SIK3-209ENST00000480222 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 EIF3HO15372 352 aaKnown RBP eCLIP12.78□□□□□ -0.36
SIK3-209ENST00000480222 CISD3P0C7P0 127 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 MLNP12872 115 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 POLR2EP19388 210 aaKnown RBP12.78□□□□□ -0.36
SIK3-209ENST00000480222 GJA4P35212 333 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 ARL4CP56559 192 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 CBLBQ13191 982 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 SLMAPQ14BN4 828 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 HIF1AQ16665 826 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 KCTD19Q17RG1 926 aaPredicted RBP12.78□□□□□ -0.36
SIK3-209ENST00000480222 ANKRD22Q5VYY1 191 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 MBLAC2Q68D91 279 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 KCTD11Q693B1 232 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 ASTLQ6HA08 431 aaPredicted RBP12.78□□□□□ -0.36
SIK3-209ENST00000480222 NAPEPLDQ6IQ20 393 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 CENPUQ71F23 418 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 LINC00523Q86TU6 105 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 ADIPOR2Q86V24 386 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 C12orf40Q86WS4 652 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 PDIK1LQ8N165 341 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 TAB3Q8N5C8 712 aaPredicted RBP12.78□□□□□ -0.36
SIK3-209ENST00000480222 CSGALNACT1Q8TDX6 532 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 TTC17Q96AE7 1141 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 ISG20Q96AZ6 181 aaKnown RBP12.78□□□□□ -0.36
SIK3-209ENST00000480222 GORASP1Q9BQQ3 440 aa12.78□□□□□ -0.36
SIK3-209ENST00000480222 OTOL1A6NHN0 477 aaPredicted RBP12.77□□□□□ -0.37
SIK3-209ENST00000480222 CD160O95971 181 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 ATP5BP06576 529 aaKnown RBP12.77□□□□□ -0.37
SIK3-209ENST00000480222 SRPRAP08240 638 aaKnown RBP12.77□□□□□ -0.37
SIK3-209ENST00000480222 CR2P20023 1033 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 CA4P22748 312 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.37
SIK3-209ENST00000480222 RHOAP61586 193 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 AP1S1P61966 158 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 ECT2LQ008S8 904 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 NSUN2Q08J23 767 aaKnown RBP eCLIP12.77□□□□□ -0.37
SIK3-209ENST00000480222 E2F5Q15329 346 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 GEN1Q17RS7 908 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.37
SIK3-209ENST00000480222 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 SPDYCQ5MJ68 293 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 PTCRAQ6ISU1 281 aaPredicted RBP12.77□□□□□ -0.37
SIK3-209ENST00000480222 LINGO4Q6UY18 593 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 TMC3Q7Z5M5 1100 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 RELL1Q8IUW5 271 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 PHTF2Q8N3S3 785 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 PGBD5Q8N414 524 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 MREGQ8N565 214 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
SIK3-209ENST00000480222 NAT16Q8N8M0 369 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 TERB1Q8NA31 727 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 KDM1BQ8NB78 822 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 TADA1Q96BN2 335 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 MSANTD3Q96H12 275 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 OXNAD1Q96HP4 312 aaPredicted RBP12.77□□□□□ -0.37
SIK3-209ENST00000480222 SERPINB12Q96P63 405 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 NUDCD1Q96RS6 583 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 SEMA3CQ99985 751 aa12.77□□□□□ -0.37
SIK3-209ENST00000480222 MLPHQ9BV36 600 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms