RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ERN2Q76MJ5 926 aaKnown RBP17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 PARS2Q7L3T8 475 aaKnown RBP17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 NLRP14Q86W24 1093 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 PROSER1Q86XN7 944 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 MFSD2AQ8NA29 543 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 OR13H1Q8NG92 308 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 CCDC114Q96M63 670 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 MCEEQ96PE7 176 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 GPATCH2LQ9NWQ4 482 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 UCKL1Q9NWZ5 548 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 NBEAQ8NFP9 2946 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 PRNPP04156 253 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 PLEKP08567 350 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 HOXB3P14651 431 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 TYRO3Q06418 890 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 MON1BQ7L1V2 547 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 TMIEQ8NEW7 156 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 ARHGEF2Q92974 986 aaKnown RBP17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 TBC1D31Q96DN5 1066 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 KLHDC7BQ96G42 594 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 AGPAT1Q99943 283 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 KDM4CQ9H3R0 1056 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 CCDC86Q9H6F5 360 aaKnown RBP17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 PREBQ9HCU5 417 aa17.72■□□□□ 0.43
ECHDC1-216ENST00000479525 PKD1L2Q7Z442 2459 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 PRAMEF26H0Y7S4 382 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 RAD51BO15315 384 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 FFAR2O15552 330 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 CREB3O43889 395 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 ITIH2P19823 946 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 ABL2P42684 1182 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 PTPN9P43378 593 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 ARRB1P49407 418 aaPredicted RBP17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 OGDHQ02218 1023 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 CYP4F3Q08477 520 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 INAVAQ3KP66 663 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 ARL13BQ3SXY8 428 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 ANO6Q4KMQ2 910 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 CARD16Q5EG05 197 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 CCDC183Q5T5S1 534 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 RETSATQ6NUM9 610 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 DNAJC24Q6P3W2 148 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 TRIM72Q6ZMU5 477 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 GCNT7Q6ZNI0 430 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 KANSL1Q7Z3B3 1105 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 HORMAD1Q86X24 394 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 ANKRD20A12PQ8NF67 263 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 HEPHQ9BQS7 1158 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 HECAQ9UBI9 543 aaPredicted RBP17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 PPARGC1AQ9UBK2 798 aaKnown RBP17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 RAXQ9Y2V3 346 aa17.71■□□□□ 0.43
ECHDC1-216ENST00000479525 TRABD2BA6NFA1 517 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 DFNA5O60443 496 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 ADRB3P13945 408 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 RHOQP17081 205 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 CLCN6P51797 869 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 NEK3P51956 506 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 SMYD5Q6GMV2 418 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 ARCQ7LC44 396 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 STRADAQ7RTN6 431 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 PTAR1Q7Z6K3 402 aaPredicted RBP17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 SLC22A18ASQ8N1D0 253 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 PCDH20Q8N6Y1 951 aaKnown RBP17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 TMEM145Q8NBT3 493 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 BAP1Q92560 729 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 CENPIQ92674 756 aaPredicted RBP17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 EXOC2Q96KP1 924 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 ERGIC2Q96RQ1 377 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 NOL6Q9H6R4 1146 aaKnown RBP17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 TMEM248Q9NWD8 314 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 DMTF1Q9Y222 760 aa17.7■□□□□ 0.42
ECHDC1-216ENST00000479525 TCRBV5S1A1TA0A578 114 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 POM121BA6NF01 834 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 KRIT1O00522 736 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 TRIM38O00635 465 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 PAK4O96013 591 aaPredicted RBP17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 UGT2B4P06133 528 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 ACADVLP49748 655 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 FBXL19Q6PCT2 694 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 ZNF783Q6ZMS7 281 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 TMC6Q7Z403 805 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 SLFN11Q7Z7L1 901 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 PHF13Q86YI8 300 aaPredicted RBP17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 C3orf20Q8ND61 904 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 OSBPL2Q9H1P3 480 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 LHX6Q9UPM6 363 aa17.69■□□□□ 0.42
ECHDC1-216ENST00000479525 GOLGA6L22H0YM25 854 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 RAMP2O60895 175 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 RFPL3O75679 317 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 NEBLO76041 1014 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 CALB1P05937 261 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 HNRNPA2B1P22626 353 aaKnown RBP17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 AKT2P31751 481 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 L1CAMP32004 1257 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 CAMK2BQ13554 666 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 POLD3Q15054 466 aaPredicted RBP17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 SMAD1Q15797 465 aaKnown RBP17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 TMEM259Q4ZIN3 620 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 TPRG1LQ5T0D9 272 aa17.68■□□□□ 0.42
ECHDC1-216ENST00000479525 SFMBT2Q5VUG0 894 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms