RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 OR2T34Q8NGX1 318 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 PPP1R16AQ96I34 528 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 GPR174Q9BXC1 333 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 OSBPL1AQ9BXW6 950 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 NEUROG2Q9H2A3 272 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 CD93Q9NPY3 652 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 UBA2Q9UBT2 640 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-217ENST00000479161 SARDHQ9UL12 918 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 REXO2Q9Y3B8 237 aaKnown RBP15.74■□□□□ 0.11
C9orf3-217ENST00000479161 ALG6Q9Y672 507 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 WASF2Q9Y6W5 498 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 KNL1Q8NG31 2342 aa15.74■□□□□ 0.11
C9orf3-217ENST00000479161 PSTPIP1O43586 416 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 BUB1BO60566 1050 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-217ENST00000479161 TMCC1O94876 653 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 CTSLP07711 333 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 NOP2P46087 812 aaKnown RBP15.73■□□□□ 0.11
C9orf3-217ENST00000479161 PSMD8P48556 350 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 CCR5P51681 352 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 CCNHP51946 323 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-217ENST00000479161 CREB5Q02930 508 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 RAD51Q06609 339 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 SPEM2Q0P670 501 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 TAZQ16635 292 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 ATP13A4Q4VNC1 1196 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 ANKRD20A8PQ5CZ79 823 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 SLC23A3Q6PIS1 610 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 HDDC3Q8N4P3 179 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 DCLK2Q8N568 766 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 PCDH19Q8TAB3 1148 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 HSPA12BQ96MM6 686 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 GDAP1L1Q96MZ0 367 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 TSGA13Q96PP4 275 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 HINFPQ9BQA5 517 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 PARD6AQ9NPB6 346 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 HECAQ9UBI9 543 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-217ENST00000479161 IPO11Q9UI26 975 aaKnown RBP15.73■□□□□ 0.11
C9orf3-217ENST00000479161 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-217ENST00000479161 FCF1Q9Y324 198 aaKnown RBP15.73■□□□□ 0.11
C9orf3-217ENST00000479161 LAMA1P25391 3075 aa15.73■□□□□ 0.11
C9orf3-217ENST00000479161 A0A1W2PP55 124 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 PLRG1O43660 514 aaKnown RBP15.72■□□□□ 0.11
C9orf3-217ENST00000479161 RNASEH2AO75792 299 aaKnown RBP15.72■□□□□ 0.11
C9orf3-217ENST00000479161 GNSP15586 552 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 COMTP21964 271 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 ITGB7P26010 798 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 HSPA9P38646 679 aaKnown RBP15.72■□□□□ 0.11
C9orf3-217ENST00000479161 RENBPP51606 427 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 SUOXP51687 545 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 LIMK1P53667 647 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 ADPRHP54922 357 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 CYTH1Q15438 398 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 IFI16Q16666 785 aaKnown RBP15.72■□□□□ 0.11
C9orf3-217ENST00000479161 DUOXA1Q1HG43 343 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 MYLK3Q32MK0 819 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 RALGPS1Q5JS13 557 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 PRR23CQ6ZRP0 262 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 ZNF354CQ86Y25 554 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 SPC24Q8NBT2 197 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 TPCN2Q8NHX9 752 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 C1orf216Q8TAB5 229 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 RAB7BQ96AH8 199 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 VOPP1Q96AW1 172 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 ERLEC1Q96DZ1 483 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 CELF6Q96J87 481 aaKnown RBP15.72■□□□□ 0.11
C9orf3-217ENST00000479161 RNF157Q96PX1 679 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 PSKH2Q96QS6 385 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 CALN1Q9BXU9 219 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 TNKS2Q9H2K2 1166 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 PREBQ9HCU5 417 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 ETNK2Q9NVF9 386 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 DKK3Q9UBP4 350 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 SERGEFQ9UGK8 458 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 AMACRQ9UHK6 382 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.72■□□□□ 0.11
C9orf3-217ENST00000479161 TRPM6Q9BX84 2022 aa15.72■□□□□ 0.11
C9orf3-217ENST00000479161 SHROOM3Q8TF72 1996 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 RCCD1A6NED2 376 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 C3orf70A6NLC5 250 aaPredicted RBP15.71■□□□□ 0.11
C9orf3-217ENST00000479161 J3KR12 359 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 KHNYNO15037 678 aaKnown RBP15.71■□□□□ 0.11
C9orf3-217ENST00000479161 ARHGAP6O43182 974 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 LATO43561 262 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 AP1G1O43747 822 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 SPOPO43791 374 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 MAFKO60675 156 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 LEFTY1O75610 366 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 IGSF6O95976 241 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 SERPINF2P08697 491 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 CD48P09326 243 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 ZFXP17010 805 aaPredicted RBP15.71■□□□□ 0.11
C9orf3-217ENST00000479161 MX2P20592 715 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 ITPKAP23677 461 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 MAPK8P45983 427 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 NUMBP49757 651 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 GALNT2Q10471 571 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 KIF5AQ12840 1032 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 ARSIQ5FYB1 569 aa15.71■□□□□ 0.11
C9orf3-217ENST00000479161 AGBL4Q5VU57 503 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms