RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ABCA7Q8IZY2 2146 aa20.84■□□□□ 0.93
VARS-224ENST00000479051 BCLAF3A2AJT9 711 aaKnown RBP20.83■□□□□ 0.93
VARS-224ENST00000479051 LRRC72A6NJI9 287 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 MEI4A8MW99 385 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 J3KR12 359 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 KPNA3O00505 521 aaPredicted RBP20.83■□□□□ 0.93
VARS-224ENST00000479051 SLC7A4O43246 635 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 FOXD2O60548 495 aaPredicted RBP20.83■□□□□ 0.93
VARS-224ENST00000479051 ZNF821O75541 412 aaPredicted RBP20.83■□□□□ 0.93
VARS-224ENST00000479051 PALMO75781 387 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 POP4O95707 220 aaKnown RBP20.83■□□□□ 0.93
VARS-224ENST00000479051 HOXD11P31277 338 aaPredicted RBP20.83■□□□□ 0.93
VARS-224ENST00000479051 ACSL1P33121 698 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 MPLP40238 635 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 RFTN1Q14699 578 aaPredicted RBP20.83■□□□□ 0.93
VARS-224ENST00000479051 WDR45BQ5MNZ6 344 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 TMCO4Q5TGY1 634 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 CHST14Q8NCH0 376 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 PCDH19Q8TAB3 1148 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 ZNF419Q96HQ0 510 aaPredicted RBP20.83■□□□□ 0.93
VARS-224ENST00000479051 LRIG1Q96JA1 1093 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 ZNF599Q96NL3 588 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 TSGA10Q9BZW7 698 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 LACRTQ9GZZ8 138 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 ZDHHC6Q9H6R6 413 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 PDFQ9HBH1 243 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 MFHAS1Q9Y4C4 1052 aa20.83■□□□□ 0.93
VARS-224ENST00000479051 NUP205Q92621 2012 aa20.83■□□□□ 0.92
VARS-224ENST00000479051 PIEZO1Q92508 2521 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 LEFTY1O75610 366 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 ZFXP17010 805 aaPredicted RBP20.82■□□□□ 0.92
VARS-224ENST00000479051 PTGER3P43115 390 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 SPEM2Q0P670 501 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 PAFAH1B3Q15102 231 aaKnown RBP20.82■□□□□ 0.92
VARS-224ENST00000479051 ARSIQ5FYB1 569 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 NCBP2-AS2Q69YL0 99 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 RABEPKQ7Z6M1 372 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 RGL4Q8IZJ4 473 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 BBS5Q8N3I7 341 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 DCLK2Q8N568 766 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 AADATQ8N5Z0 425 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 KIAA1524Q8TCG1 905 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 PIGKQ92643 395 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 ZNF830Q96NB3 372 aaPredicted RBP20.82■□□□□ 0.92
VARS-224ENST00000479051 RNF157Q96PX1 679 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 CINPQ9BW66 212 aaPredicted RBP20.82■□□□□ 0.92
VARS-224ENST00000479051 OSBPL1AQ9BXW6 950 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 NEUROG2Q9H2A3 272 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 VPS45Q9NRW7 570 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 SALL4Q9UJQ4 1053 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 SARDHQ9UL12 918 aa20.82■□□□□ 0.92
VARS-224ENST00000479051 GPR179Q6PRD1 2367 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 METTL12A8MUP2 240 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 KRIT1O00522 736 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 CTSLP07711 333 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 MX2P20592 715 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 HOXD12P35452 270 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 MYLK3Q32MK0 819 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 POM121L1PQ3SYA9 428 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.81■□□□□ 0.92
VARS-224ENST00000479051 SYT12Q8IV01 421 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 LRRC8AQ8IWT6 810 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 SYCE1Q8N0S2 351 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 NETO2Q8NC67 525 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 OR14C36Q8NHC7 312 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 GOLPH3Q9H4A6 298 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 SEMA4GQ9NTN9 838 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 SERGEFQ9UGK8 458 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 SEPT3Q9UH03 358 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 TPX2Q9ULW0 747 aaKnown RBP20.81■□□□□ 0.92
VARS-224ENST00000479051 WASF2Q9Y6W5 498 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 DUSP10Q9Y6W6 482 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 OTOGLQ3ZCN5 2332 aa20.81■□□□□ 0.92
VARS-224ENST00000479051 SDK1Q7Z5N4 2213 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 MACROD2A1Z1Q3 448 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 FAM47DPA6NHR8 397 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 MFSD11O43934 449 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 DRD3P35462 400 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 RENBPP51606 427 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 GRM3Q14832 879 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 CYTH1Q15438 398 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 CSRP2Q16527 193 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 ATXN7L2Q5T6C5 722 aaPredicted RBP20.8■□□□□ 0.92
VARS-224ENST00000479051 ARHGAP36Q6ZRI8 547 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 RFX6Q8HWS3 928 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 SLC41A1Q8IVJ1 513 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 OR2T34Q8NGX1 318 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 OR6K2Q8NGY2 324 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 RNF25Q96BH1 459 aaPredicted RBP20.8■□□□□ 0.92
VARS-224ENST00000479051 KDM4CQ9H3R0 1056 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 SUSD2Q9UGT4 822 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 ADGRG1Q9Y653 693 aa20.8■□□□□ 0.92
VARS-224ENST00000479051 RIF1Q5UIP0 2472 aaKnown RBP20.79■□□□□ 0.92
VARS-224ENST00000479051 APOL1O14791 398 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 KRT86O43790 486 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 ZRANB2O95218 330 aaKnown RBP eCLIP20.79■□□□□ 0.92
VARS-224ENST00000479051 ZNF806P0C7X5 589 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 GNSP15586 552 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 ITPKAP23677 461 aa20.79■□□□□ 0.92
VARS-224ENST00000479051 ITGB7P26010 798 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms