RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 CTHRC1Q96CG8 243 aa6.4□□□□□ -1.38
SSR3-207ENST00000478842 WDYHV1Q96HA8 205 aa6.4□□□□□ -1.38
SSR3-207ENST00000478842 TBATAQ96M53 351 aa6.4□□□□□ -1.38
SSR3-207ENST00000478842 NAP1L4Q99733 375 aaKnown RBP6.4□□□□□ -1.38
SSR3-207ENST00000478842 ZNF747Q9BV97 191 aa6.4□□□□□ -1.38
SSR3-207ENST00000478842 ABHD16BQ9H3Z7 469 aa6.4□□□□□ -1.38
SSR3-207ENST00000478842 VCPKMTQ9H867 229 aa6.4□□□□□ -1.38
SSR3-207ENST00000478842 AMFRQ9UKV5 643 aa6.4□□□□□ -1.38
SSR3-207ENST00000478842 UBE2J1Q9Y385 318 aaPredicted RBP6.4□□□□□ -1.38
SSR3-207ENST00000478842 NAV1Q8NEY1 1877 aa6.4□□□□□ -1.39
SSR3-207ENST00000478842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 GXYLT2A0PJZ3 443 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 GCOM1H8Y6P7 765 aaPredicted RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 QSOX1O00391 747 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 VWA5AO00534 786 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 CES2O00748 559 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 CTAGE5O15320 804 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 CTIFO43310 598 aaKnown RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 SPRY2O43597 315 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 NARSO43776 548 aaKnown RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 NPSP0C0P6 89 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 MYCLP12524 364 aaPredicted RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 MYOGP15173 224 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 MAPK9P45984 424 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 AARSP49588 968 aaKnown RBP eCLIP6.39□□□□□ -1.39
SSR3-207ENST00000478842 MCM2P49736 904 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 PAPOLAP51003 745 aaKnown RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 SEC24CP53992 1094 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 ACVR2BQ13705 512 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 TAF12Q16514 161 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 CYP1B1Q16678 543 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 TBRG1Q3YBR2 411 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 KIAA1755Q5JYT7 1200 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 FAM90A2PQ658T7 463 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 CCDC144NLQ6NUI1 221 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 MSANTD2Q6P1R3 559 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 PIK3AP1Q6ZUJ8 805 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 Q6ZWC4 215 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 P3H2Q8IVL5 708 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 FTSJ3Q8IY81 847 aaKnown RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 TMEM57Q8N5G2 664 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 PNPLA1Q8N8W4 532 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 ACTRT2Q8TDY3 377 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 CCDC17Q96LX7 622 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 TRAPPC9Q96Q05 1148 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 PRR25Q96S07 402 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 API5Q9BZZ5 524 aaKnown RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 BRD8Q9H0E9 1235 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 ELAC1Q9H777 363 aaKnown RBP6.39□□□□□ -1.39
SSR3-207ENST00000478842 FBXO28Q9NVF7 368 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 NDUFAF4Q9P032 175 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 MGAT4CQ9UBM8 478 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 SWAP70Q9UH65 585 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 DAPP1Q9UN19 280 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 CNTN6Q9UQ52 1028 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 MYRFQ9Y2G1 1151 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 COL4A3Q01955 1670 aa6.39□□□□□ -1.39
SSR3-207ENST00000478842 MCM3APO60318 1980 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 FAM90A18PA6NE21 464 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 FAM90A16PA6NEW6 464 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 TMEM191CA6NGB0 347 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 FAM90A9PA6NNJ1 464 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 FAM90A5PA8MXJ8 464 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 KIF28PB7ZC32 967 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 MPHOSPH10O00566 681 aaKnown RBP6.38□□□□□ -1.39
SSR3-207ENST00000478842 ATP2A1O14983 1001 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 RPP40O75818 363 aaKnown RBP6.38□□□□□ -1.39
SSR3-207ENST00000478842 CER1O95813 267 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 CA3P07451 260 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 FAM90A15PP0C7V4 464 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 SUPT20HL2P0C7V6 817 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 FAM90A14PP0C7W9 464 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 ACTN1P12814 892 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 ZNF37AP17032 561 aaPredicted RBP6.38□□□□□ -1.39
SSR3-207ENST00000478842 RFC2P35250 354 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 MPLP40238 635 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 TXNL4AP83876 142 aaKnown RBP6.38□□□□□ -1.39
SSR3-207ENST00000478842 E2F1Q01094 437 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 ITGA7Q13683 1181 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 RPS6KA2Q15349 733 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 BTBD16Q32M84 506 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 LEXMQ3ZCV2 418 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 ZNF569Q5MCW4 686 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 TTC22Q5TAA0 569 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 PEG10Q86TG7 708 aaKnown RBP6.38□□□□□ -1.39
SSR3-207ENST00000478842 ULK2Q8IYT8 1036 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 PAF1Q8N7H5 531 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 MIGA1Q8NAN2 632 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 C3orf49Q96BT1 292 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 FAR2Q96K12 515 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 UBXN10Q96LJ8 280 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 MEIS3Q99687 375 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 PRRX2Q99811 253 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 PYM1Q9BRP8 204 aaKnown RBP6.38□□□□□ -1.39
SSR3-207ENST00000478842 CINPQ9BW66 212 aaPredicted RBP6.38□□□□□ -1.39
SSR3-207ENST00000478842 TEX13BQ9BXU2 312 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 VPS16Q9H269 839 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 PIH1D3Q9NQM4 214 aaKnown RBP6.38□□□□□ -1.39
SSR3-207ENST00000478842 DUSP22Q9NRW4 184 aa6.38□□□□□ -1.39
SSR3-207ENST00000478842 TMLHEQ9NVH6 421 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms