RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 VTI1AQ96AJ9 217 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 SH3KBP1Q96B97 665 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 ALKBH8Q96BT7 664 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 SH3YL1Q96HL8 342 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 ZNF560Q96MR9 790 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 OPALINQ96PE5 141 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 PCIF1Q9H4Z3 704 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 NANOGQ9H9S0 305 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 TXNRD2Q9NNW7 524 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 ANLNQ9NQW6 1124 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 ENPP5Q9UJA9 477 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 ANAPC5Q9UJX4 755 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 SRCAPQ6ZRS2 3230 aa12.85□□□□□ -0.35
RTFDC1-207ENST00000477573 A0A1B0GTW7 788 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 EXOC1LA0A1B0GW35 172 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 TYW5A2RUC4 315 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PCP4L1A6NKN8 68 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 FAM155AB1AL88 458 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ANKRD63C9JTQ0 380 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 KLF11O14901 512 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PI15O43692 258 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 FAM189A1O60320 539 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ERBB2P04626 1255 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 SERPINA6P08185 405 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ABCB4P21439 1286 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 MAP4P27816 1152 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 STAT1P42224 750 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 NR2C2P49116 596 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 FKBP1BP68106 108 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 TRPC3Q13507 836 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 EMC2Q15006 297 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ACAP2Q15057 778 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PGS1Q32NB8 556 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 BRDTQ58F21 947 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ATG16L1Q676U5 607 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 DPY19L2P1Q6NXN4 242 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 CYP20A1Q6UW02 462 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 FKBP9P1Q75LS8 142 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 FIBCD1Q8N539 461 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PJA1Q8NG27 643 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 FAM167AQ96KS9 214 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ZNF597Q96LX8 424 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 KCNK16Q96T55 309 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 CBWD1Q9BRT8 395 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 POLR3FQ9H1D9 316 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PLEKHA5Q9HAU0 1116 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 NPAP1Q9NZP6 1156 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PPARGC1AQ9UBK2 798 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PCDHGA10Q9Y5H3 936 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ZNFX1Q9P2E3 1918 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 C16orf96A6NNT2 1141 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PI4K2BG5E9Z4 385 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ERVH48-1M5A8F1 160 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 RFPL2O75678 378 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 NADKO95544 446 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 TRIM49P0CI25 452 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 TRIM49CP0CI26 452 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PRKAR1BP31321 381 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 HSD17B2P37059 387 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 GPR85P60893 370 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PRAMEP78395 509 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PTPROQ16827 1216 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 AASDHQ4L235 1098 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 SNAP47Q5SQN1 464 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PERM1Q5SV97 790 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ADAT2Q7Z6V5 191 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 UNC45BQ8IWX7 931 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 CPNE9Q8IYJ1 553 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 DEPDC4Q8N2C3 294 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 KIAA1958Q8N8K9 716 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 RFFLQ8WZ73 363 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 FIG4Q92562 907 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 CIDECQ96AQ7 238 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 FEM1CQ96JP0 617 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 TRIM56Q9BRZ2 755 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 NPLQ9BXD5 320 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 GPN2Q9H9Y4 310 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 SIX2Q9NPC8 291 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 SLC39A1Q9NY26 324 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 PKD2L2Q9NZM6 624 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 ITGA11Q9UKX5 1188 aa12.84□□□□□ -0.35
RTFDC1-207ENST00000477573 CROCCQ5TZA2 2017 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 A0A1W2PQ72 361 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ISPDA4D126 451 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 ASB14A6NK59 587 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 TRPC5OSA6NMA1 111 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 MEI4A8MW99 385 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 TMX2-CTNND1H3BSU7 103 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 DBTP11182 482 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 IL10P22301 178 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 DNAJB2P25686 324 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 RBL1P28749 1068 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 TALDO1P37837 337 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 CASP3P42574 277 aa12.83□□□□□ -0.36
RTFDC1-207ENST00000477573 MAGEA4P43358 317 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms