RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ZWILCHQ9H900 591 aa17.99■□□□□ 0.47
PTPN7-209ENST00000477554 SGK2Q9HBY8 427 aa17.99■□□□□ 0.47
PTPN7-209ENST00000477554 TMEM9BQ9NQ34 198 aa17.99■□□□□ 0.47
PTPN7-209ENST00000477554 ETNK2Q9NVF9 386 aa17.99■□□□□ 0.47
PTPN7-209ENST00000477554 PPP2R2CQ9Y2T4 447 aa17.99■□□□□ 0.47
PTPN7-209ENST00000477554 CNOT1A5YKK6 2376 aaKnown RBP17.99■□□□□ 0.47
PTPN7-209ENST00000477554 RASA4BC9J798 803 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 ARHGAP33O14559 1287 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 BCAT2O15382 392 aaPredicted RBP17.98■□□□□ 0.47
PTPN7-209ENST00000477554 RASA4O43374 803 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 LEFTY1O75610 366 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 WNT1P04628 370 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 MAT2AP31153 395 aaKnown RBP17.98■□□□□ 0.47
PTPN7-209ENST00000477554 DNA2P51530 1060 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 TPI1P60174 286 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 PPP6R3Q5H9R7 873 aaPredicted RBP17.98■□□□□ 0.47
PTPN7-209ENST00000477554 PPM1JQ5JR12 505 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 PIP5KL1Q5T9C9 394 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 MINDY1Q8N5J2 469 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 CTNNBL1Q8WYA6 563 aaPredicted RBP17.98■□□□□ 0.47
PTPN7-209ENST00000477554 SLC6A18Q96N87 628 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 LRRC19Q9H756 370 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 TM9SF3Q9HD45 589 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 TMEM51Q9NW97 253 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 CWC15Q9P013 229 aaKnown RBP17.98■□□□□ 0.47
PTPN7-209ENST00000477554 ANAPC7Q9UJX3 599 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 NCKAP1Q9Y2A7 1128 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 CA5BQ9Y2D0 317 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 REXO2Q9Y3B8 237 aaKnown RBP17.98■□□□□ 0.47
PTPN7-209ENST00000477554 SCINQ9Y6U3 715 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 KNL1Q8NG31 2342 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 WASH4PA8MWX3 477 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 J3KR12 359 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 KDELR3O43731 214 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 TMEM253P0C7T8 217 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 HOXD12P35452 270 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 CCNHP51946 323 aaPredicted RBP17.98■□□□□ 0.47
PTPN7-209ENST00000477554 SLC25A11Q02978 314 aaKnown RBP17.98■□□□□ 0.47
PTPN7-209ENST00000477554 ATP13A4Q4VNC1 1196 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 ZNF662Q6ZS27 426 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 ARHGAP12Q8IWW6 846 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 HSPH1Q92598 858 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 KLK6Q92876 244 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 EPAS1Q99814 870 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 TSGA10Q9BZW7 698 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 SLC39A8Q9C0K1 460 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 MAGEH1Q9H213 219 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 FZD4Q9ULV1 537 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 SCML1Q9UN30 329 aa17.98■□□□□ 0.47
PTPN7-209ENST00000477554 A0A1B0GTW7 788 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 EEF2KO00418 725 aaKnown RBP17.97■□□□□ 0.47
PTPN7-209ENST00000477554 KPNA3O00505 521 aaPredicted RBP17.97■□□□□ 0.47
PTPN7-209ENST00000477554 INSIG1O15503 277 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 PJA2O43164 708 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 PRPSAP2O60256 369 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 GJB3O75712 270 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 CD48P09326 243 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 RARAP10276 462 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 KIF5AQ12840 1032 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 SERINC3Q13530 473 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 DPYSQ14117 519 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 PRAMEF14Q5SWL7 426 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 RFX8Q6ZV50 586 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 ZNF354CQ86Y25 554 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 OR2T34Q8NGX1 318 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 CEP76Q8TAP6 659 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 KIAA1524Q8TCG1 905 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 EXOC2Q96KP1 924 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 CAMK1GQ96NX5 476 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 OSGEPQ9NPF4 335 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 KCND1Q9NSA2 647 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 IL36AQ9UHA7 158 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 GGT7Q9UJ14 662 aa17.97■□□□□ 0.47
PTPN7-209ENST00000477554 GOLGA6L9A6NEM1 432 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 PLRG1O43660 514 aaKnown RBP17.96■□□□□ 0.47
PTPN7-209ENST00000477554 BUB1O43683 1085 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 KRT86O43790 486 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 FOXD2O60548 495 aaPredicted RBP17.96■□□□□ 0.47
PTPN7-209ENST00000477554 RNF8O76064 485 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 TMCC1O94876 653 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 ERCC2P18074 760 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 CD27P26842 260 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 CLCN6P51797 869 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 AIF1P55008 147 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 FAM193AP78312 1265 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 MMRN1Q13201 1228 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 CYTH1Q15438 398 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 KIF19Q2TAC6 998 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 CARD16Q5EG05 197 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 LRRC73Q5JTD7 316 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 PSAPL1Q6NUJ1 521 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 RETSATQ6NUM9 610 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 UMODL1-AS1Q8N2C9 162 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 DEFB124Q8NES8 71 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 NSMCE3Q96MG7 304 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 ZDHHC6Q9H6R6 413 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 PDFQ9HBH1 243 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 MRPL47Q9HD33 250 aaKnown RBP17.96■□□□□ 0.47
PTPN7-209ENST00000477554 KLHL11Q9NVR0 708 aa17.96■□□□□ 0.47
PTPN7-209ENST00000477554 TFR2Q9UP52 801 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms