RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ARSIQ5FYB1 569 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 C6orf132Q5T0Z8 1188 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 FAM46CQ5VWP2 391 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 KCTD16Q68DU8 428 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 KRBA2Q6ZNG9 492 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 ZNF683Q8IZ20 524 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 WDTC1Q8N5D0 677 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 GRIN3AQ8TCU5 1115 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 HTR3CQ8WXA8 447 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 FUBP1Q96AE4 644 aaKnown RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 PPP1R13BQ96KQ4 1090 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 DNAI2Q9GZS0 605 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 CLPBQ9H078 707 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 ST7Q9NRC1 585 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 STARD5Q9NSY2 213 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 VPS51Q9UID3 782 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 KIAA1257Q9ULG3 409 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 ITM2BQ9Y287 266 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 ZDHHC9Q9Y397 364 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 HS3ST4Q9Y661 456 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 WASF2Q9Y6W5 498 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 CRYBG3Q68DQ2 2970 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 NBASA2RRP1 2371 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 FAM170AA1A519 330 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 A6NNZ2 444 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 C1QTNF3-AMACRE9PGA6 284 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 CETN3O15182 167 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 AQP9O43315 295 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 SUV39H1O43463 412 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 PCDH8O95206 1070 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 APOEP02649 317 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 SLC5A2P31639 672 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 AKT2P31751 481 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 NNMTP40261 264 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 ABL2P42684 1182 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 SYKP43405 635 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 FMO5P49326 533 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 APBA1Q02410 837 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 SULT2A1Q06520 285 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 PNOCQ13519 176 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 SLC12A1Q13621 1099 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 CLCA4Q14CN2 919 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 ZCCHC8Q6NZY4 707 aaKnown RBP9.98□□□□□ -0.81
COL4A5-204ENST00000477429 KYAT3Q6YP21 454 aaKnown RBP9.98□□□□□ -0.81
COL4A5-204ENST00000477429 RBM44Q6ZP01 1051 aaKnown RBP9.98□□□□□ -0.81
COL4A5-204ENST00000477429 DPY19L3Q6ZPD9 716 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 ERN2Q76MJ5 926 aaKnown RBP9.98□□□□□ -0.81
COL4A5-204ENST00000477429 DSG4Q86SJ6 1040 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 VASH2Q86V25 355 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 SFTPA2Q8IWL1 248 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 DEFB106AQ8N104 65 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 PPM1KQ8N3J5 372 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 LMX1AQ8TE12 382 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 RPRD1AQ96P16 312 aaPredicted RBP9.98□□□□□ -0.81
COL4A5-204ENST00000477429 CCNL2Q96S94 520 aaPredicted RBP9.98□□□□□ -0.81
COL4A5-204ENST00000477429 VPS28Q9UK41 221 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 HS3ST2Q9Y278 367 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 TBC1D30Q9Y2I9 924 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 FADS3Q9Y5Q0 445 aa9.98□□□□□ -0.81
COL4A5-204ENST00000477429 IGLON5A6NGN9 336 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 NTN3O00634 580 aaPredicted RBP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 STX10O60499 249 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 PAGE1O75459 146 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 LEFTY1O75610 366 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ADCY5O95622 1261 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 CD160O95971 181 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 MYL1P05976 194 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ALPPL2P10696 532 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 JUNDP17535 347 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ITIH2P19823 946 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ETV5P41161 510 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 DUSP3P51452 185 aaPredicted RBP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ADKP55263 362 aaKnown RBP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 HNRNPKP61978 463 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 YWHAZP63104 245 aaKnown RBP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 NUCB2P80303 420 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 PDE1CQ14123 709 aaPredicted RBP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 C5orf22Q49AR2 442 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 NEK5Q6P3R8 708 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 PARS2Q7L3T8 475 aaKnown RBP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 BEND5Q7L4P6 421 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 TMEM110Q86TL2 294 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 CCDC117Q8IWD4 279 aaPredicted RBP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ATP6V0D2Q8N8Y2 350 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ATP11CQ8NB49 1132 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 TMIEQ8NEW7 156 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 OR7D4Q8NG98 312 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 IFT43Q96FT9 208 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 SLC2A13Q96QE2 648 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 CPXM1Q96SM3 734 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 CCDC3Q9BQI4 270 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 LRRC61Q9BV99 259 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 BOCQ9BWV1 1114 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 HDAC8Q9BY41 377 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 SLC17A9Q9BYT1 436 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 FOXP3Q9BZS1 431 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 FAM204AQ9H8W3 233 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 POPDC2Q9HBU9 364 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 DDIT4Q9NX09 232 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ZNF212Q9UDV6 495 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms