RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 BTBD6Q96KE9 485 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 KDM4CQ9H3R0 1056 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 GAREM1Q9H706 876 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 HPCAL4Q9UM19 191 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 ANKRD6Q9Y2G4 727 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 SNX11Q9Y5W9 270 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 EEF2KO00418 725 aaKnown RBP21.55■■□□□ 1.04
LIME1-204ENST00000476183 LATO43561 262 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 CYP1A2P05177 515 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 IL1R2P27930 398 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 HTR7P34969 479 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 EIF4A3P38919 411 aaKnown RBP21.55■■□□□ 1.04
LIME1-204ENST00000476183 YBEYP58557 167 aaPredicted RBP21.55■■□□□ 1.04
LIME1-204ENST00000476183 RACK1P63244 317 aaKnown RBP21.55■■□□□ 1.04
LIME1-204ENST00000476183 TEAD4Q15561 434 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 CCDC122Q5T0U0 273 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 NETO2Q8NC67 525 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 DNAJC7Q99615 494 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 HEPHQ9BQS7 1158 aa21.55■■□□□ 1.04
LIME1-204ENST00000476183 HECAQ9UBI9 543 aaPredicted RBP21.55■■□□□ 1.04
LIME1-204ENST00000476183 FNDC3AQ9Y2H6 1198 aaKnown RBP21.55■■□□□ 1.04
LIME1-204ENST00000476183 TPRP12270 2363 aaKnown RBP21.54■■□□□ 1.04
LIME1-204ENST00000476183 EIF3CLB5ME19 914 aaKnown RBP21.54■■□□□ 1.04
LIME1-204ENST00000476183 BUB1O43683 1085 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 WNT1P04628 370 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 CEACAM1P13688 526 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 MAT2AP31153 395 aaKnown RBP21.54■■□□□ 1.04
LIME1-204ENST00000476183 GKP32189 559 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 PCK1P35558 622 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 GEMIN4P57678 1058 aaKnown RBP21.54■■□□□ 1.04
LIME1-204ENST00000476183 SERINC3Q13530 473 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 PARP15Q460N3 678 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 IL27RAQ6UWB1 636 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 ERN2Q76MJ5 926 aaKnown RBP21.54■■□□□ 1.04
LIME1-204ENST00000476183 ZNF354CQ86Y25 554 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 PLPP6Q8IY26 295 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 OR6K2Q8NGY2 324 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 CELF6Q96J87 481 aaKnown RBP21.54■■□□□ 1.04
LIME1-204ENST00000476183 EIF3CQ99613 913 aaKnown RBP21.54■■□□□ 1.04
LIME1-204ENST00000476183 NUP85Q9BW27 656 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 HDAC8Q9BY41 377 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 LRRC19Q9H756 370 aa21.54■■□□□ 1.04
LIME1-204ENST00000476183 TP53BP1Q12888 1972 aaPredicted RBP21.54■■□□□ 1.04
LIME1-204ENST00000476183 ZSCAN5CA6NGD5 496 aaPredicted RBP21.53■■□□□ 1.04
LIME1-204ENST00000476183 KCNK3O14649 394 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 TMCC1O94876 653 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 CER1O95813 267 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 GSRP00390 522 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 CTSKP43235 329 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 SLC14A1Q13336 389 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 TRIM14Q14142 442 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 ACAP1Q15027 740 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 ASTE1Q2TB18 679 aaPredicted RBP21.53■■□□□ 1.04
LIME1-204ENST00000476183 PPP6R3Q5H9R7 873 aaPredicted RBP21.53■■□□□ 1.04
LIME1-204ENST00000476183 RFX8Q6ZV50 586 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 TRIM69Q86WT6 500 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 PSTKQ8IV42 348 aaKnown RBP21.53■■□□□ 1.04
LIME1-204ENST00000476183 OR8K1Q8NGG5 319 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 CAMK1GQ96NX5 476 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 ZDHHC6Q9H6R6 413 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 PREBQ9HCU5 417 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 DYRK4Q9NR20 520 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 CHD8Q9HCK8 2581 aa21.53■■□□□ 1.04
LIME1-204ENST00000476183 CEP295Q9C0D2 2601 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 A0A1W2PR77 199 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 VILLO15195 856 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 SH3BP5O60239 455 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 ERCC2P18074 760 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 SMTNL2Q2TAL5 461 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 ATXN7L2Q5T6C5 722 aaPredicted RBP21.52■■□□□ 1.04
LIME1-204ENST00000476183 TXNRD3NBQ6F5E7 133 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 ADAT2Q7Z6V5 191 aaKnown RBP21.52■■□□□ 1.04
LIME1-204ENST00000476183 RYBPQ8N488 228 aaPredicted RBP21.52■■□□□ 1.04
LIME1-204ENST00000476183 OR2AP1Q8NGE2 309 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 SERAC1Q96JX3 654 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 NCAPGQ9BPX3 1015 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 SLC39A8Q9C0K1 460 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 AASDHPPTQ9NRN7 309 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 CWC15Q9P013 229 aaKnown RBP21.52■■□□□ 1.04
LIME1-204ENST00000476183 ANAPC7Q9UJX3 599 aa21.52■■□□□ 1.04
LIME1-204ENST00000476183 TPX2Q9ULW0 747 aaKnown RBP21.52■■□□□ 1.04
LIME1-204ENST00000476183 RNGTTO60942 597 aaKnown RBP21.51■■□□□ 1.03
LIME1-204ENST00000476183 ZNF883P0CG24 379 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 ITGB7P26010 798 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 NDST2P52849 883 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 SNRPD1P62314 119 aaKnown RBP21.51■■□□□ 1.03
LIME1-204ENST00000476183 FAM193AP78312 1265 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 MAPK8IP2Q13387 824 aaPredicted RBP21.51■■□□□ 1.03
LIME1-204ENST00000476183 DPYSQ14117 519 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 PIGHQ14442 188 aaPredicted RBP21.51■■□□□ 1.03
LIME1-204ENST00000476183 INO80DQ53TQ3 878 aaPredicted RBP21.51■■□□□ 1.03
LIME1-204ENST00000476183 AFMIDQ63HM1 303 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 PRPF39Q86UA1 669 aaKnown RBP21.51■■□□□ 1.03
LIME1-204ENST00000476183 ARHGAP12Q8IWW6 846 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 NPWQ8N729 165 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 NIPA2Q8N8Q9 360 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 PPP1R16AQ96I34 528 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 PACSIN1Q9BY11 444 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 SLC32A1Q9H598 525 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 ZWILCHQ9H900 591 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms