RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 TSGA13Q96PP4 275 aa23.21■■□□□ 1.31
YIF1A-206ENST00000474986 HEPHQ9BQS7 1158 aa23.21■■□□□ 1.31
YIF1A-206ENST00000474986 TM6SF2Q9BZW4 377 aa23.21■■□□□ 1.31
YIF1A-206ENST00000474986 LZTFL1Q9NQ48 299 aa23.21■■□□□ 1.31
YIF1A-206ENST00000474986 IL36AQ9UHA7 158 aa23.21■■□□□ 1.31
YIF1A-206ENST00000474986 SMG5Q9UPR3 1016 aaKnown RBP23.21■■□□□ 1.31
YIF1A-206ENST00000474986 NUP205Q92621 2012 aa23.21■■□□□ 1.31
YIF1A-206ENST00000474986 hCG_1818297A0A087WSY0 165 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 MID1O15344 667 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 RHOBTB1O94844 696 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 FTCDO95954 541 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 IGSF6O95976 241 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 LMNAP02545 664 aaKnown RBP23.2■■□□□ 1.3
YIF1A-206ENST00000474986 PTPN7P35236 360 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 CETN2P41208 172 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 PSMD8P48556 350 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 DNA2P51530 1060 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 CCNHP51946 323 aaPredicted RBP23.2■■□□□ 1.3
YIF1A-206ENST00000474986 GBE1Q04446 702 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 PLK5Q496M5 336 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 CCDC50Q8IVM0 306 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 PIP4K2CQ8TBX8 421 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 NSMCE1Q8WV22 266 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 ALS2CR12Q96Q35 445 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 WSB2Q9NYS7 404 aaPredicted RBP23.2■■□□□ 1.3
YIF1A-206ENST00000474986 HECAQ9UBI9 543 aaPredicted RBP23.2■■□□□ 1.3
YIF1A-206ENST00000474986 LHX3Q9UBR4 397 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 SEPT3Q9UH03 358 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 MBD1Q9UIS9 605 aaPredicted RBP23.2■■□□□ 1.3
YIF1A-206ENST00000474986 FZD4Q9ULV1 537 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 INVSQ9Y283 1065 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 NCKAP1Q9Y2A7 1128 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 GPR179Q6PRD1 2367 aa23.2■■□□□ 1.3
YIF1A-206ENST00000474986 POP4O95707 220 aaKnown RBP23.19■■□□□ 1.3
YIF1A-206ENST00000474986 PEX11BO96011 259 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 CTSLP07711 333 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 HOXD11P31277 338 aaPredicted RBP23.19■■□□□ 1.3
YIF1A-206ENST00000474986 CSNK1DP48730 415 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 NR2C2P49116 596 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 RAD51Q06609 339 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 ZNF33AQ06730 810 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 LBRQ14739 615 aaKnown RBP23.19■■□□□ 1.3
YIF1A-206ENST00000474986 PMS2CLQ68D20 193 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 TIGD7Q6NT04 549 aaPredicted RBP23.19■■□□□ 1.3
YIF1A-206ENST00000474986 PRR23BQ6ZRT6 265 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 BZW1Q7L1Q6 419 aaKnown RBP23.19■■□□□ 1.3
YIF1A-206ENST00000474986 FAM160A2Q8N612 972 aaPredicted RBP23.19■■□□□ 1.3
YIF1A-206ENST00000474986 CHST14Q8NCH0 376 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 ALG3Q92685 438 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 FAM131CQ96AQ9 280 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 HDAC11Q96DB2 347 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 HES6Q96HZ4 224 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 LOXL4Q96JB6 756 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 PSKH2Q96QS6 385 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 BRD8Q9H0E9 1235 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 DUSP15Q9H1R2 295 aaPredicted RBP23.19■■□□□ 1.3
YIF1A-206ENST00000474986 SGK2Q9HBY8 427 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 CD93Q9NPY3 652 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 FBXL12Q9NXK8 326 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 WASF2Q9Y6W5 498 aa23.19■■□□□ 1.3
YIF1A-206ENST00000474986 MAP3K13O43283 966 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 ZSCAN12O43309 604 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 BCKDHBP21953 392 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 TGM2P21980 687 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 CCNCP24863 283 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 HSPA9P38646 679 aaKnown RBP23.18■■□□□ 1.3
YIF1A-206ENST00000474986 RENBPP51606 427 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 NSUN2Q08J23 767 aaKnown RBP eCLIP23.18■■□□□ 1.3
YIF1A-206ENST00000474986 CCDC15Q0P6D6 951 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 SLC10A2Q12908 348 aaPredicted RBP23.18■■□□□ 1.3
YIF1A-206ENST00000474986 HNRNPDQ14103 355 aaKnown RBP23.18■■□□□ 1.3
YIF1A-206ENST00000474986 MYLK3Q32MK0 819 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 LAIR1Q6GTX8 287 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 LPCAT2Q7L5N7 544 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 BBS5Q8N3I7 341 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 TRIM58Q8NG06 486 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 TOE1Q96GM8 510 aaKnown RBP23.18■■□□□ 1.3
YIF1A-206ENST00000474986 OMDQ99983 421 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 CINPQ9BW66 212 aaPredicted RBP23.18■■□□□ 1.3
YIF1A-206ENST00000474986 BTBD1Q9H0C5 482 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 PCED1AQ9H1Q7 454 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 SARDHQ9UL12 918 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 PLXND1Q9Y4D7 1925 aa23.18■■□□□ 1.3
YIF1A-206ENST00000474986 DDX3YO15523 660 aaKnown RBP23.17■■□□□ 1.3
YIF1A-206ENST00000474986 SLC7A4O43246 635 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 CST8O60676 142 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 LEFTY1O75610 366 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 KRT10P13645 584 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 GRM3Q14832 879 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 PDK1Q15118 436 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 ARSIQ5FYB1 569 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 KAZNQ674X7 775 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 BBS12Q6ZW61 710 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 HDDC3Q8N4P3 179 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 AADATQ8N5Z0 425 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 FRMD1Q8N878 549 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 TSEN2Q8NCE0 465 aaKnown RBP23.17■■□□□ 1.3
YIF1A-206ENST00000474986 MAML1Q92585 1016 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 PPP1R16AQ96I34 528 aa23.17■■□□□ 1.3
YIF1A-206ENST00000474986 OLFM3Q96PB7 478 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms