RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CCDC130P13994 396 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 TAC1P20366 129 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 AKAP5P24588 427 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 RBL1P28749 1068 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 SSTR1P30872 391 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 HOXA11P31270 313 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 HNRNPH1P31943 449 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 RPL9P32969 192 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 MAGEA6P43360 314 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 RPL34P49207 117 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PCBP3P57721 371 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 INHBEP58166 350 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 MRPS5P82675 430 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 MRPS6P82932 125 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ZBTB16Q05516 673 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 DEUP1Q05D60 604 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ADCY1Q08828 1119 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 SREBF2Q12772 1141 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 DNAJC3Q13217 504 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PRPSAP1Q14558 356 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 FASTKD3Q14CZ7 662 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 TAF5Q15542 800 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 MAPRE1Q15691 268 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ZRSR2Q15696 482 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 SPDYAQ5MJ70 313 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 UBAP2Q5T6F2 1119 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ANKRD22Q5VYY1 191 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 FBXW10Q5XX13 1052 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ICE2Q659A1 982 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ITPRIPL1Q6GPH6 555 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 CASC4Q6P4E1 433 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ALKAL1Q6UXT8 129 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM47EQ6ZV65 393 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PPM1NQ8N819 430 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 C12orf29Q8N999 325 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PPP1R14CQ8TAE6 165 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 GABPB2Q8TAK5 448 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 NPLOC4Q8TAT6 608 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 GSDMBQ8TAX9 411 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 ZSCAN18Q8TBC5 510 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 MAGEC3Q8TD91 643 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 DEPDC1BQ8WUY9 529 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC44A1Q8WWI5 657 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 KCTD13Q8WZ19 329 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 CENPIQ92674 756 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PGBD4Q96DM1 585 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 SPATA13Q96N96 652 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PPP1R2P1Q96PQ5 205 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC9A7Q96T83 725 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 G6PC3Q9BUM1 346 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC6A17Q9H1V8 727 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM96AQ9H5X1 160 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 MANSC1Q9H8J5 431 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 POPDC2Q9HBU9 364 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 GPATCH2LQ9NWQ4 482 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 EURLQ9NYK6 297 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 CPA4Q9UI42 421 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 IPPQ9Y573 584 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 PTCH2Q9Y6C5 1203 aa6.03□□□□□ -1.44
ATPAF1-204ENST00000474020 RALGAPA2Q2PPJ7 1873 aa6.02□□□□□ -1.44
ATPAF1-204ENST00000474020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TCRBV9S1A1TA0A576 114 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 SDR42E2A6NKP2 422 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ERI2A8K979 691 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 M0QYT0 321 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 HAS3O00219 553 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 SIGLEC6O43699 453 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 EDF1O60869 148 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 DUSP11O75319 330 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 NEBLO76041 1014 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PRAMEF1O95521 474 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 THP07101 528 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 C6orf222P0C671 652 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 C1QTNF9P0C862 333 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ODC1P11926 461 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PTPN1P18031 435 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PGAM1P18669 254 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 L1CAMP32004 1257 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 CYP2C18P33260 490 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 RPA3P35244 121 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TKTL1P51854 596 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 GTF2A1P52655 376 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 HDAC4P56524 1084 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 HUNKP57058 714 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 GPX6P59796 221 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 LILRA4P59901 499 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TPI1P60174 286 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TSPY1Q01534 308 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ADIGQ0VDE8 80 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 AP1B1Q10567 949 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 RIPK1Q13546 671 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 CCDC142Q17RM4 750 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 PARP6Q2NL67 630 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 DCAF6Q58WW2 860 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 XKR4Q5GH76 650 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 MDH1BQ5I0G3 518 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 TMEM63BQ5T3F8 832 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ANKRD20A3Q5VUR7 823 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 ZNF449Q6P9G9 518 aa6.02□□□□□ -1.45
ATPAF1-204ENST00000474020 NPNTQ6UXI9 565 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms