RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 IGSF6O95976 241 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 GSRP00390 522 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 PRNPP04156 253 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 C5AR1P21730 350 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 CD6P30203 668 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 OXTRP30559 389 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 GARSP41250 739 aaKnown RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 CCNHP51946 323 aaPredicted RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 GBE1Q04446 702 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 RAD51Q06609 339 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 GALNT2Q10471 571 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 ZNF235Q14590 738 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 RFTN1Q14699 578 aaPredicted RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 LBRQ14739 615 aaKnown RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 CYTH1Q15438 398 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 ELF2Q15723 593 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 LPAL2Q16609 132 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 POM121L1PQ3SYA9 428 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 ATXN7L2Q5T6C5 722 aaPredicted RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 TMCO4Q5TGY1 634 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 CCDC181Q5TID7 509 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 TIGD7Q6NT04 549 aaPredicted RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 SLC36A4Q6YBV0 504 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 BZW1Q7L1Q6 419 aaKnown RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 BBS5Q8N3I7 341 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 PLD5Q8N7P1 536 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 FRMD1Q8N878 549 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 CHST14Q8NCH0 376 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 CCNYQ8ND76 341 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 PIP4K2CQ8TBX8 421 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 GRIN3AQ8TCU5 1115 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 NKD2Q969F2 451 aaPredicted RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 ZNF599Q96NL3 588 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 EPC1Q9H2F5 836 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 PABPC3Q9H361 631 aaKnown RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 CD93Q9NPY3 652 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 DYRK4Q9NR20 520 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 FBXL12Q9NXK8 326 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 DTLQ9NZJ0 730 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 PPM1HQ9ULR3 514 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 EML5Q05BV3 1969 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 hCG_1818297A0A087WSY0 165 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 A0A1W2PP55 124 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 LEFTY1O75610 366 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 RHOBTB1O94844 696 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 POP4O95707 220 aaKnown RBP12.61□□□□□ -0.39
DDX56-209ENST00000473924 LMNAP02545 664 aaKnown RBP12.61□□□□□ -0.39
DDX56-209ENST00000473924 BCKDHBP21953 392 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 PEX5P50542 639 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 RENBPP51606 427 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 RPL6Q02878 288 aaKnown RBP12.61□□□□□ -0.39
DDX56-209ENST00000473924 SLC10A2Q12908 348 aaPredicted RBP12.61□□□□□ -0.39
DDX56-209ENST00000473924 PPP2R5EQ16537 467 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 TAZQ16635 292 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 MYLK3Q32MK0 819 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 ARSIQ5FYB1 569 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 MARC1Q5VT66 337 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 NPNTQ6UXI9 565 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 USP30Q70CQ3 517 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 LPCAT2Q7L5N7 544 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 KBTBD6Q86V97 674 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 HDDC3Q8N4P3 179 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 TRIM58Q8NG06 486 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 OR6K2Q8NGY2 324 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 UBE2Q2Q8WVN8 375 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 ALG3Q92685 438 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 TOE1Q96GM8 510 aaKnown RBP12.61□□□□□ -0.39
DDX56-209ENST00000473924 PPP1R16AQ96I34 528 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 EXOC2Q96KP1 924 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 HEMGNQ9BXL5 484 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 BTBD1Q9H0C5 482 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 LHX3Q9UBR4 397 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 SEPT3Q9UH03 358 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 SMG5Q9UPR3 1016 aaKnown RBP12.61□□□□□ -0.39
DDX56-209ENST00000473924 CACNA1HO95180 2353 aa12.61□□□□□ -0.39
DDX56-209ENST00000473924 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 PPP1R12AO14974 1030 aaPredicted RBP12.6□□□□□ -0.39
DDX56-209ENST00000473924 CTSLP07711 333 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 PYGMP11217 842 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 TGM2P21980 687 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 CCNCP24863 283 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 GKP32189 559 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 MMP13P45452 471 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 NR2C2P49116 596 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 SLC10A7Q0GE19 358 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 CCDC15Q0P6D6 951 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 AP1B1Q10567 949 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 ZNF211Q13398 564 aaPredicted RBP12.6□□□□□ -0.39
DDX56-209ENST00000473924 PDK1Q15118 436 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 PLK5Q496M5 336 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.6□□□□□ -0.39
DDX56-209ENST00000473924 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 TSEN2Q8NCE0 465 aaKnown RBP12.6□□□□□ -0.39
DDX56-209ENST00000473924 P3H4Q92791 437 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 HDAC11Q96DB2 347 aa12.6□□□□□ -0.39
DDX56-209ENST00000473924 HES6Q96HZ4 224 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms