RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 NETO1Q8TDF5 533 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 SNX19Q92543 992 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 ISG20Q96AZ6 181 aaKnown RBP19.28■□□□□ 0.68
PTCD3-210ENST00000473829 ORAI3Q9BRQ5 295 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 MIR1-1HGQ9H1L0 117 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 CAPN10Q9HC96 672 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 KLHL11Q9NVR0 708 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 IL36AQ9UHA7 158 aa19.28■□□□□ 0.68
PTCD3-210ENST00000473829 ZSCAN5CA6NGD5 496 aaPredicted RBP19.27■□□□□ 0.68
PTCD3-210ENST00000473829 KPNA3O00505 521 aaPredicted RBP19.27■□□□□ 0.68
PTCD3-210ENST00000473829 LEFTY1O75610 366 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 MTA2O94776 668 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 SERPINF2P08697 491 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 FECHP22830 423 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 ARL4AP40617 200 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 RECQLP46063 649 aaPredicted RBP19.27■□□□□ 0.68
PTCD3-210ENST00000473829 PAPOLAP51003 745 aaKnown RBP19.27■□□□□ 0.68
PTCD3-210ENST00000473829 ARSEP51690 589 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 MESDQ14696 234 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 ATXN7L2Q5T6C5 722 aaPredicted RBP19.27■□□□□ 0.68
PTCD3-210ENST00000473829 PIP5KL1Q5T9C9 394 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 ARHGAP36Q6ZRI8 547 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 TMIEQ8NEW7 156 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 OR2T34Q8NGX1 318 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 OR14C36Q8NHC7 312 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 FAM71BQ8TC56 605 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 RFFLQ8WZ73 363 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 PANX2Q96RD6 677 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 CDV3Q9UKY7 258 aaKnown RBP19.27■□□□□ 0.68
PTCD3-210ENST00000473829 TFR2Q9UP52 801 aa19.27■□□□□ 0.68
PTCD3-210ENST00000473829 FARP1Q9Y4F1 1045 aaPredicted RBP19.27■□□□□ 0.68
PTCD3-210ENST00000473829 CACNA1EQ15878 2313 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 SOWAHDA6NJG2 315 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 CDX4O14627 284 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-210ENST00000473829 PLRG1O43660 514 aaKnown RBP19.26■□□□□ 0.67
PTCD3-210ENST00000473829 PRAMEF11O60813 436 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 LCA5LO95447 670 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 PRNPP04156 253 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 ENGP17813 658 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 IL4RP24394 825 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 MAN1A1P33908 653 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 CDH6P55285 790 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 TAS2R38P59533 333 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 PPP2CBP62714 309 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 PPP2CAP67775 309 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 SFSWAPQ12872 951 aaKnown RBP19.26■□□□□ 0.67
PTCD3-210ENST00000473829 MMRN1Q13201 1228 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 HADHQ16836 314 aaKnown RBP19.26■□□□□ 0.67
PTCD3-210ENST00000473829 STPG1Q5TH74 334 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 OR2AP1Q8NGE2 309 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 CEP76Q8TAP6 659 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 HEPHQ9BQS7 1158 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 NUSAP1Q9BXS6 441 aaKnown RBP19.26■□□□□ 0.67
PTCD3-210ENST00000473829 ZDHHC6Q9H6R6 413 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 EBF2Q9HAK2 575 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 HECAQ9UBI9 543 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-210ENST00000473829 LHX3Q9UBR4 397 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 INTUQ9ULD6 942 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 SLC6A14Q9UN76 642 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 DOCK9Q9BZ29 2069 aa19.26■□□□□ 0.67
PTCD3-210ENST00000473829 TP53BP1Q12888 1972 aaPredicted RBP19.25■□□□□ 0.67
PTCD3-210ENST00000473829 ARHGAP42A6NI28 874 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 LRRC72A6NJI9 287 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 DFFAO00273 331 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 SLC30A4O14863 429 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 SLC7A4O43246 635 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 GSRP00390 522 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 LIMK1P53667 647 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 DPYSL3Q14195 570 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 KRT81Q14533 505 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 CYTH1Q15438 398 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 INO80DQ53TQ3 878 aaPredicted RBP19.25■□□□□ 0.67
PTCD3-210ENST00000473829 RABEPKQ7Z6M1 372 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 RHOT2Q8IXI1 618 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 PLPP6Q8IY26 295 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 DONSONQ9NYP3 566 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 UBA2Q9UBT2 640 aaPredicted RBP19.25■□□□□ 0.67
PTCD3-210ENST00000473829 SUSD2Q9UGT4 822 aa19.25■□□□□ 0.67
PTCD3-210ENST00000473829 A0A1B0GTW7 788 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 BCAT2O15382 392 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-210ENST00000473829 GNSP15586 552 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 MAGEA1P43355 309 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 MAPK8P45983 427 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 RHOAP61586 193 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 SNRPD1P62314 119 aaKnown RBP19.24■□□□□ 0.67
PTCD3-210ENST00000473829 BNC1Q01954 994 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 TCEAL1Q15170 157 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 TMCO3Q6UWJ1 677 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 LAYNQ6UX15 382 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 CCDC170Q8IYT3 715 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 RYBPQ8N488 228 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-210ENST00000473829 OR2I1PQ8NGU4 316 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 CASKIN2Q8WXE0 1202 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 EXOC2Q96KP1 924 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 LCMT1Q9UIC8 334 aa19.24■□□□□ 0.67
PTCD3-210ENST00000473829 SHROOM3Q8TF72 1996 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 C4orf47A7E2U8 309 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 KRIT1O00522 736 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 CD27P26842 260 aa19.23■□□□□ 0.67
PTCD3-210ENST00000473829 CDC25BP30305 580 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms