RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 EPN2O95208 641 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 HLA-DRAP01903 254 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MMP1P03956 469 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 NR4A1P22736 598 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 DCKP27707 260 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RFC1P35251 1148 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 HSD17B2P37059 387 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 NAMPTP43490 491 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CDC20Q12834 499 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 COASYQ13057 564 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 STX3Q13277 289 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 DLGAP5Q15398 846 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 EXOC3L4Q17RC7 722 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 PLA2G4EQ3MJ16 856 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 IQSEC1Q6DN90 963 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MCM10Q7L590 875 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM83AQ86UY5 434 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CDR2LQ86X02 465 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF677Q86XU0 584 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RTKN2Q8IZC4 609 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FBXL6Q8N531 539 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF655Q8N720 491 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 POU5F2Q8N7G0 328 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RBM15BQ8NDT2 890 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 C7orf57Q8NEG2 295 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 DCAF4Q8WV16 495 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM149B1Q96BN6 582 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 NRBF2Q96F24 287 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CNDP2Q96KP4 475 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CNBD2Q96M20 576 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RPRD1AQ96P16 312 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC29A1Q99808 456 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 DCUN1D5Q9BTE7 237 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 THTPAQ9BU02 230 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 WDR12Q9GZL7 423 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 DUSP15Q9H1R2 295 aaPredicted RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 SLA2Q9H6Q3 261 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CPNE5Q9HCH3 593 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 PCYOX1Q9UHG3 505 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 TAGLN3Q9UI15 199 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 PTBP2Q9UKA9 531 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 MYRFQ9Y2G1 1151 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 RAXQ9Y2V3 346 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 WBP11Q9Y2W2 641 aaKnown RBP5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 UBR2Q8IWV8 1755 aa5.23□□□□□ -1.57
TMEM39A-206ENST00000473684 CCDC194A0A1B0GVG4 234 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIM75PA6NK02 468 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 H3BUI4 141 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 NOL3O60936 208 aaKnown RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 IL1BP01584 269 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 FGGP02679 453 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 HMGN1P05114 100 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 THBDP07204 575 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 PCNAP12004 261 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 GFAPP14136 432 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 PSMC3P17980 439 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 IL10P22301 178 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 TGM1P22735 817 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 CASP1P29466 404 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 NMT1P30419 496 aaKnown RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 NR2C2P49116 596 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF200P98182 395 aaPredicted RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 TFDP1Q14186 410 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF460Q14592 562 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 STAT4Q14765 748 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 ACAP2Q15057 778 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 TESK1Q15569 626 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIP13Q15645 432 aaPredicted RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 ABCB5Q2M3G0 1257 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 CYP27C1Q4G0S4 372 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 KCNT1Q5JUK3 1230 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 ANKRD26P1Q6NSI1 321 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 RNF111Q6ZNA4 994 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF704Q6ZNC4 412 aaPredicted RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 C15orf52Q6ZUT6 534 aaKnown RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 RFX8Q6ZV50 586 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 STRA8Q7Z7C7 330 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 SETD3Q86TU7 594 aaPredicted RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 TTC7BQ86TV6 843 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 CD163Q86VB7 1156 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 SHCBP1Q8NEM2 672 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC26A7Q8TE54 656 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 PYDC1Q8WXC3 89 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 ATP2A3Q93084 1043 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 FCRL3Q96P31 734 aaPredicted RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 METTL22Q9BUU2 404 aaPredicted RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF341Q9BYN7 854 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 FRMD8Q9BZ67 464 aaPredicted RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 CDC42EP4Q9H3Q1 356 aaKnown RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 RAD21L1Q9H4I0 556 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 RPF2Q9H7B2 306 aaKnown RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 KCTD5Q9NXV2 234 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC39A1Q9NY26 324 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 EBF1Q9UH73 591 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 CNOT11Q9UKZ1 510 aaKnown RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 EIF3LQ9Y262 564 aaKnown RBP5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 TRAF6Q9Y4K3 522 aa5.22□□□□□ -1.57
TMEM39A-206ENST00000473684 MAU2Q9Y6X3 613 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms