RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 ACP1P24666 158 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 L1CAMP32004 1257 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 ADRA1BP35368 520 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 ACVRL1P37023 503 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 MAPKAPK2P49137 400 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 GEMIN4P57678 1058 aaKnown RBP20.13■□□□□ 0.81
COL9A3-210ENST00000472880 RPS21P63220 83 aaKnown RBP20.13■□□□□ 0.81
COL9A3-210ENST00000472880 DAB2P98082 770 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 NRG1Q02297 640 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-210ENST00000472880 MAPK8IP2Q13387 824 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-210ENST00000472880 ZNF211Q13398 564 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-210ENST00000472880 COL9A2Q14055 689 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-210ENST00000472880 RAB6CQ53S08 254 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 CDKAL1Q5VV42 579 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 RYBPQ8N488 228 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-210ENST00000472880 OR4C6Q8NH72 309 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 SLC30A5Q8TAD4 765 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 FAM174AQ8TBP5 190 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 DCBLD2Q96PD2 775 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 TM6SF2Q9BZW4 377 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 RAB6CQ9H0N0 254 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 ITPR1Q14643 2758 aa20.13■□□□□ 0.81
COL9A3-210ENST00000472880 A0A087WV48 116 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 CXorf51AA0A1B0GTR3 108 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 C2CD4BA6NLJ0 364 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 TRIM38O00635 465 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 FFAR2O15552 330 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 RHOQP17081 205 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 CHRNB2P17787 502 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 STAT1P42224 750 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 PTPN9P43378 593 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 NSFP46459 744 aaKnown RBP20.12■□□□□ 0.81
COL9A3-210ENST00000472880 JAM2P57087 298 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 CCDC14Q49A88 953 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 MANEALQ5VSG8 457 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 PARS2Q7L3T8 475 aaKnown RBP20.12■□□□□ 0.81
COL9A3-210ENST00000472880 STRADAQ7RTN6 431 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 ABI3BPQ7Z7G0 1075 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 SLC25A45Q8N413 288 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 JOSD2Q8TAC2 188 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 GPT2Q8TD30 523 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 TBC1D31Q96DN5 1066 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 LRIG1Q96JA1 1093 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 FEM1CQ96JP0 617 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 OSBPL2Q9H1P3 480 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 RETREG1Q9H6L5 497 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 TMEM248Q9NWD8 314 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 UCKL1Q9NWZ5 548 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 HECAQ9UBI9 543 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-210ENST00000472880 DNAI1Q9UI46 699 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 HPCAL4Q9UM19 191 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 FADS3Q9Y5Q0 445 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 ACTL7AQ9Y615 435 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 AK5Q9Y6K8 562 aa20.12■□□□□ 0.81
COL9A3-210ENST00000472880 EPHB6O15197 1021 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 AP1G1O43747 822 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 PIAS2O75928 621 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 GJB6O95452 261 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 ALPPL2P10696 532 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 POLD3Q15054 466 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-210ENST00000472880 KYAT3Q6YP21 454 aaKnown RBP20.11■□□□□ 0.81
COL9A3-210ENST00000472880 Q6ZSR6 202 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 ZSCAN30Q86W11 494 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 NLRP14Q86W24 1093 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 DCP2Q8IU60 420 aaKnown RBP20.11■□□□□ 0.81
COL9A3-210ENST00000472880 SLC22A18ASQ8N1D0 253 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 FAM172AQ8WUF8 416 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 ISG20Q96AZ6 181 aaKnown RBP20.11■□□□□ 0.81
COL9A3-210ENST00000472880 IFT43Q96FT9 208 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 PCMTD1Q96MG8 357 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-210ENST00000472880 SLC17A9Q9BYT1 436 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 NRSN2Q9GZP1 204 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 LMBRD1Q9NUN5 540 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 NDFIP2Q9NV92 336 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 DNAJC28Q9NX36 388 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 CLCA2Q9UQC9 943 aa20.11■□□□□ 0.81
COL9A3-210ENST00000472880 RAMP2O60895 175 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 LRIG2O94898 1065 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 CD160O95971 181 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 KRT3P12035 628 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 ABCG1P45844 678 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 E2F1Q01094 437 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 INSM1Q01101 510 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-210ENST00000472880 SEMG2Q02383 582 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 SYCP1Q15431 976 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 CCDC185Q8N715 623 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 ANKRD20A12PQ8NF67 263 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 OR6K2Q8NGY2 324 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 RFFLQ8WZ73 363 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 ARHGEF2Q92974 986 aaKnown RBP20.1■□□□□ 0.81
COL9A3-210ENST00000472880 GBP4Q96PP9 640 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 SELENOOQ9BVL4 669 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 MAGEH1Q9H213 219 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 ADAM22Q9P0K1 906 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 SIK3Q9Y2K2 1263 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 HS3ST3A1Q9Y663 406 aa20.1■□□□□ 0.81
COL9A3-210ENST00000472880 NBEAQ8NFP9 2946 aa20.09■□□□□ 0.81
COL9A3-210ENST00000472880 FAM72CH0Y354 149 aa20.09■□□□□ 0.81
COL9A3-210ENST00000472880 NEMP1O14524 444 aa20.09■□□□□ 0.81
COL9A3-210ENST00000472880 PAK4O96013 591 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms