RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PPP1R7Q15435 360 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 CYTH1Q15438 398 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 OASLQ15646 514 aaKnown RBP17.13■□□□□ 0.33
CCM2-205ENST00000472223 PTPRNQ16849 979 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 CCDC70Q6NSX1 233 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 C22orf39Q6P5X5 142 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 ARHGEF18Q6ZSZ5 1173 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 MAATS1Q7Z4T9 603 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 DSG4Q86SJ6 1040 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 SFTPA1Q8IWL2 248 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 TEX26Q8N6G2 289 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 ALLCQ8N6M5 410 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 PJA1Q8NG27 643 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 MRGPRX3Q96LB0 322 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 AGAP3Q96P47 875 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 PSKH2Q96QS6 385 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 IL12RB2Q99665 862 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 FOXQ1Q9C009 403 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 CACNA2D2Q9NY47 1150 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 GOLGA6AQ9NYA3 693 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 C5orf60A6NFR6 353 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 TMEM221A6NGB7 291 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 TTC34A8MYJ7 566 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 K7ERQ8 282 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 M0R296 226 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 PDE2AO00408 941 aaPredicted RBP17.12■□□□□ 0.33
CCM2-205ENST00000472223 OPHN1O60890 802 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 GSRP00390 522 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 VAV1P15498 845 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 CA4P22748 312 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 PTPN3P26045 913 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 IL12RB1P42701 662 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 WASP42768 502 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 KCNJ1P48048 391 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 P3H1Q32P28 736 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 HNRNPA1L2Q32P51 320 aaKnown RBP17.12■□□□□ 0.33
CCM2-205ENST00000472223 CARD16Q5EG05 197 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 RALGPS1Q5JS13 557 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 PLPP6Q8IY26 295 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 TXNDC5Q8NBS9 432 aaKnown RBP17.12■□□□□ 0.33
CCM2-205ENST00000472223 OR2AP1Q8NGE2 309 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 CCHCR1Q8TD31 782 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 TEKT5Q96M29 485 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 IER2Q9BTL4 223 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 TM6SF2Q9BZW4 377 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 DDX47Q9H0S4 455 aaKnown RBP17.12■□□□□ 0.33
CCM2-205ENST00000472223 TMEM245Q9H330 911 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 C10orf88Q9H8K7 445 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 FBRSQ9HAH7 460 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 RBM12Q9NTZ6 932 aaKnown RBP17.12■□□□□ 0.33
CCM2-205ENST00000472223 HECAQ9UBI9 543 aaPredicted RBP17.12■□□□□ 0.33
CCM2-205ENST00000472223 RSPH14Q9UHP6 348 aa17.12■□□□□ 0.33
CCM2-205ENST00000472223 SMAD6O43541 496 aaKnown RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 GCATO75600 419 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 POP4O95707 220 aaKnown RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 PEX11BO96011 259 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 HOXB2P14652 356 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 RPS9P46781 194 aaKnown RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 SCNN1BP51168 640 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 DR1Q01658 176 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 DHX34Q14147 1143 aaKnown RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 ANKRD20A2Q5SQ80 823 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 ANKRD20A1Q5TYW2 823 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 ANKRD20A3Q5VUR7 823 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 SYDE1Q6ZW31 735 aaPredicted RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 ZNF572Q7Z3I7 529 aaPredicted RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 IL17RCQ8NAC3 791 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 TSEN2Q8NCE0 465 aaKnown RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 OR8D1Q8WZ84 308 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 EZH1Q92800 747 aaPredicted RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 SPATA13Q96N96 652 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 KRT12Q99456 494 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 TNKS2Q9H2K2 1166 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 USP29Q9HBJ7 922 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 POLMQ9NP87 494 aaPredicted RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 PAK5Q9P286 719 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 PCYOX1Q9UHG3 505 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 MTF2Q9Y483 593 aaPredicted RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 ACTL7AQ9Y615 435 aa17.11■□□□□ 0.33
CCM2-205ENST00000472223 MYO18AQ92614 2054 aaKnown RBP17.11■□□□□ 0.33
CCM2-205ENST00000472223 ATG2BQ96BY7 2078 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.1■□□□□ 0.33
CCM2-205ENST00000472223 SHISA7A6NL88 538 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 CHURC1-FNTBB4DL54 471 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 CD160O95971 181 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 SERPINF2P08697 491 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 HLA-EP13747 358 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 CSNK1DP48730 415 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 LMAN1P49257 510 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 C2orf54Q08AI8 447 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 WASHC5Q12768 1159 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 SFSWAPQ12872 951 aaKnown RBP17.1■□□□□ 0.33
CCM2-205ENST00000472223 ZBTB17Q13105 803 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 ELAVL3Q14576 367 aaKnown RBP17.1■□□□□ 0.33
CCM2-205ENST00000472223 MYLK3Q32MK0 819 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 CFAP58Q5T655 872 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 Q6ZVU0 165 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 SRLQ86TD4 932 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 ZNF567Q8N184 647 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms