RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 FILIP1LQ4L180 1135 aa19.22■□□□□ 0.67
COMMD1-207ENST00000471704 PRPF39Q86UA1 669 aaKnown RBP19.22■□□□□ 0.67
COMMD1-207ENST00000471704 TRIM69Q86WT6 500 aa19.22■□□□□ 0.67
COMMD1-207ENST00000471704 GATAD2AQ86YP4 633 aa19.22■□□□□ 0.67
COMMD1-207ENST00000471704 MFSD2AQ8NA29 543 aa19.22■□□□□ 0.67
COMMD1-207ENST00000471704 ARRDC3Q96B67 414 aa19.22■□□□□ 0.67
COMMD1-207ENST00000471704 SPON2Q9BUD6 331 aa19.22■□□□□ 0.67
COMMD1-207ENST00000471704 DNAI1Q9UI46 699 aa19.22■□□□□ 0.67
COMMD1-207ENST00000471704 DMTF1Q9Y222 760 aa19.22■□□□□ 0.67
COMMD1-207ENST00000471704 GOLGA8CPA6NN73 597 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 C1QTNF3-AMACRE9PGA6 284 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 YKT6O15498 198 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 CCDC172P0C7W6 258 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 RHOQP17081 205 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 CHRNA3P32297 505 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 PBX1P40424 430 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 PRKCIP41743 596 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 SERPINH1P50454 418 aaKnown RBP19.21■□□□□ 0.67
COMMD1-207ENST00000471704 CLCN6P51797 869 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 CAMK2BQ13554 666 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 ASIC2Q16515 512 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 SLC45A4Q5BKX6 768 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 PIP5KL1Q5T9C9 394 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 RWDD4Q6NW29 188 aaKnown RBP19.21■□□□□ 0.67
COMMD1-207ENST00000471704 IQCHQ86VS3 1027 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 SPATS2Q86XZ4 545 aaKnown RBP19.21■□□□□ 0.67
COMMD1-207ENST00000471704 GALNT15Q8N3T1 639 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 ARHGEF2Q92974 986 aaKnown RBP19.21■□□□□ 0.67
COMMD1-207ENST00000471704 VOPP1Q96AW1 172 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 TBC1D31Q96DN5 1066 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 CCDC86Q9H6F5 360 aaKnown RBP19.21■□□□□ 0.67
COMMD1-207ENST00000471704 NOL6Q9H6R4 1146 aaKnown RBP19.21■□□□□ 0.67
COMMD1-207ENST00000471704 DKK4Q9UBT3 224 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 FTSJ1Q9UET6 329 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 FZD10Q9ULW2 581 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 ADAMTS20P59510 1910 aa19.21■□□□□ 0.67
COMMD1-207ENST00000471704 URB1O60287 2271 aaKnown RBP19.21■□□□□ 0.67
COMMD1-207ENST00000471704 DDX3XO00571 662 aaKnown RBP eCLIP19.2■□□□□ 0.665e-8■■■■■ 31.8
COMMD1-207ENST00000471704 MAPKAPK2P49137 400 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 MAMLD1Q13495 774 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 PLEKHA7Q6IQ23 1121 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 DPY19L3Q6ZPD9 716 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 KANSL1Q7Z3B3 1105 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 SLFN11Q7Z7L1 901 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 MARCH9Q86YJ5 346 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 TMIEQ8NEW7 156 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 CNPY3Q9BT09 278 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 TRIM7Q9C029 511 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 FCF1Q9Y324 198 aaKnown RBP19.2■□□□□ 0.66
COMMD1-207ENST00000471704 PCDHGA1Q9Y5H4 931 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 WASF2Q9Y6W5 498 aa19.2■□□□□ 0.66
COMMD1-207ENST00000471704 SERPINC1P01008 464 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 ITGAVP06756 1048 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 SKILP12757 684 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 EPHA8P29322 1005 aaPredicted RBP19.19■□□□□ 0.66
COMMD1-207ENST00000471704 MAT2AP31153 395 aaKnown RBP19.19■□□□□ 0.66
COMMD1-207ENST00000471704 L1CAMP32004 1257 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 ARRB1P49407 418 aaPredicted RBP19.19■□□□□ 0.66
COMMD1-207ENST00000471704 FANCCQ00597 558 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 OVGP1Q12889 678 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 SFMBT2Q5VUG0 894 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 SCYL2Q6P3W7 929 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 ARFGAP1Q8N6T3 406 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 MDM1Q8TC05 714 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 VCPIP1Q96JH7 1222 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 RETREG1Q9H6L5 497 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 PREBQ9HCU5 417 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 IL36AQ9UHA7 158 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 GPSM3Q9Y4H4 160 aa19.19■□□□□ 0.66
COMMD1-207ENST00000471704 ATRXP46100 2492 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 KPNA3O00505 521 aaPredicted RBP19.18■□□□□ 0.66
COMMD1-207ENST00000471704 BNIP3Q12983 259 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 SETMARQ53H47 684 aaPredicted RBP19.18■□□□□ 0.66
COMMD1-207ENST00000471704 ARSIQ5FYB1 569 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 FIGNQ5HY92 759 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 RETSATQ6NUM9 610 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 NEK5Q6P3R8 708 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 DHRS13Q6UX07 377 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 LEKR1Q6ZMV7 388 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 TMC6Q7Z403 805 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 OXR1Q8N573 874 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 TMEM145Q8NBT3 493 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 GRIN3AQ8TCU5 1115 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 TSC1Q92574 1164 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 PEBP4Q96S96 227 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 EDEM3Q9BZQ6 932 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 CEP44Q9C0F1 390 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 KLC2Q9H0B6 622 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 GPATCH2LQ9NWQ4 482 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 TRPM6Q9BX84 2022 aa19.18■□□□□ 0.66
COMMD1-207ENST00000471704 TRABD2BA6NFA1 517 aa19.17■□□□□ 0.66
COMMD1-207ENST00000471704 PRAMEF26H0Y7S4 382 aa19.17■□□□□ 0.66
COMMD1-207ENST00000471704 ENC1O14682 589 aa19.17■□□□□ 0.66
COMMD1-207ENST00000471704 MAGEC1O60732 1142 aa19.17■□□□□ 0.66
COMMD1-207ENST00000471704 RNGTTO60942 597 aaKnown RBP19.17■□□□□ 0.66
COMMD1-207ENST00000471704 LEFTY1O75610 366 aa19.17■□□□□ 0.66
COMMD1-207ENST00000471704 LDOC1O95751 146 aaPredicted RBP19.17■□□□□ 0.66
COMMD1-207ENST00000471704 C1SP09871 688 aa19.17■□□□□ 0.66
COMMD1-207ENST00000471704 SLC20A2Q08357 652 aa19.17■□□□□ 0.66
COMMD1-207ENST00000471704 EFHC2Q5JST6 749 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms