RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 PRPF39Q86UA1 669 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 FAM131CQ96AQ9 280 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 ISG20Q96AZ6 181 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 HMCESQ96FZ2 354 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 PPP1R16AQ96I34 528 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 SLC6A18Q96N87 628 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 EIF3CQ99613 913 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 ORAI3Q9BRQ5 295 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 NUP85Q9BW27 656 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 NOL6Q9H6R4 1146 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 ZDHHC6Q9H6R6 413 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 AASDHPPTQ9NRN7 309 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 ZNHIT6Q9NWK9 470 aaKnown RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 DONSONQ9NYP3 566 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 HECAQ9UBI9 543 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-218ENST00000470942 ANKRD6Q9Y2G4 727 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 WASF2Q9Y6W5 498 aa15.99■□□□□ 0.15
HDAC6-218ENST00000470942 RNF103O00237 685 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 CEACAM1P13688 526 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 C21orf59P57076 290 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 SNRPD1P62314 119 aaKnown RBP15.98■□□□□ 0.15
HDAC6-218ENST00000470942 ACAP1Q15027 740 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 KIF19Q2TAC6 998 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 PARP15Q460N3 678 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 PIP5KL1Q5T9C9 394 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 ERN2Q76MJ5 926 aaKnown RBP15.98■□□□□ 0.15
HDAC6-218ENST00000470942 VSTM4Q8IW00 320 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 UMODL1-AS1Q8N2C9 162 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 OR8K1Q8NGG5 319 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 SKA1Q96BD8 255 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 SERAC1Q96JX3 654 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 BTBD6Q96KE9 485 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 KLC2Q9H0B6 622 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 DEF6Q9H4E7 631 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 IL21RQ9HBE5 538 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 IP6K2Q9UHH9 426 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 ANAPC7Q9UJX3 599 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 TPX2Q9ULW0 747 aaKnown RBP15.98■□□□□ 0.15
HDAC6-218ENST00000470942 SNX11Q9Y5W9 270 aa15.98■□□□□ 0.15
HDAC6-218ENST00000470942 PCNX2A6NKB5 2137 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 UPK3BL1B0FP48 263 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 UPK3BL2E5RIL1 263 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 KRIT1O00522 736 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 KCNK3O14649 394 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 RNGTTO60942 597 aaKnown RBP15.97■□□□□ 0.15
HDAC6-218ENST00000470942 GJB3O75712 270 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 CYP1A2P05177 515 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 CD59P13987 128 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 HNRNPH3P31942 346 aaKnown RBP15.97■□□□□ 0.15
HDAC6-218ENST00000470942 PCK1P35558 622 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 SLC14A1Q13336 389 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 SERINC3Q13530 473 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 PIGHQ14442 188 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-218ENST00000470942 RFX8Q6ZV50 586 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 PSTKQ8IV42 348 aaKnown RBP15.97■□□□□ 0.15
HDAC6-218ENST00000470942 NETO2Q8NC67 525 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 OR6K2Q8NGY2 324 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 ARHGEF26Q96DR7 871 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 CELF6Q96J87 481 aaKnown RBP15.97■□□□□ 0.15
HDAC6-218ENST00000470942 HDAC8Q9BY41 377 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 ZWILCHQ9H900 591 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 PREBQ9HCU5 417 aa15.97■□□□□ 0.15
HDAC6-218ENST00000470942 MYO1FO00160 1098 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 SH3BP5O60239 455 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 TMCC1O94876 653 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 PCDH8O95206 1070 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 GSRP00390 522 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 ERCC2P18074 760 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 CD38P28907 300 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 GKP32189 559 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 SSR1P43307 286 aaKnown RBP15.96■□□□□ 0.15
HDAC6-218ENST00000470942 NDST2P52849 883 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 TAS2R38P59533 333 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 RHOAP61586 193 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 SMTNL2Q2TAL5 461 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 MYLK3Q32MK0 819 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 BOLA3Q53S33 107 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 SLC45A4Q5BKX6 768 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 KCNT1Q5JUK3 1230 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 ATXN7L2Q5T6C5 722 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-218ENST00000470942 FBXL19Q6PCT2 694 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 CYP4V2Q6ZWL3 525 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-218ENST00000470942 PIP4P1Q86T03 277 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 TRIM69Q86WT6 500 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 PLPP6Q8IY26 295 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 OR2AP1Q8NGE2 309 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 CASKIN2Q8WXE0 1202 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 HSPH1Q92598 858 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 DNAJC7Q99615 494 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 TM7SF3Q9NS93 570 aa15.96■□□□□ 0.15
HDAC6-218ENST00000470942 CWC15Q9P013 229 aaKnown RBP15.96■□□□□ 0.15
HDAC6-218ENST00000470942 UBA2Q9UBT2 640 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-218ENST00000470942 FNDC3AQ9Y2H6 1198 aaKnown RBP15.96■□□□□ 0.15
HDAC6-218ENST00000470942 A0A1W2PQU0 124 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 ARHGAP42A6NI28 874 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 C10orf142B7Z368 130 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 H3BRJ5 948 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 WNT9AO14904 365 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 VILLO15195 856 aa15.95■□□□□ 0.14
HDAC6-218ENST00000470942 LATO43561 262 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms