RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SEPT3Q9UH03 358 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 DMGDHQ9UI17 866 aaKnown RBP11.44□□□□□ -0.58
SREBF1-209ENST00000470247 TRHDEQ9UKU6 1024 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 CA14Q9ULX7 337 aa11.44□□□□□ -0.58
SREBF1-209ENST00000470247 NCOR1O75376 2440 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 TTC34A8MYJ7 566 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 WASH3PC4AMC7 463 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 TP73O15350 636 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 ZNF189O75820 626 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 MMP2P08253 660 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 NFKB1P19838 968 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 DRD1P21728 446 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 IL12RB1P42701 662 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 GEMIN4P57678 1058 aaKnown RBP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 SLC7A5Q01650 507 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 NSUN2Q08J23 767 aaKnown RBP eCLIP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 GRSF1Q12849 480 aaKnown RBP eCLIP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 TRADDQ15628 312 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 DUPD1Q68J44 220 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 SYDE1Q6ZW31 735 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 GSTA5Q7RTV2 222 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 MAATS1Q7Z4T9 603 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 PLPP6Q8IY26 295 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 CCDC89Q8N998 374 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 ATP11CQ8NB49 1132 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 NSMCE1Q8WV22 266 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 SEC14L1Q92503 715 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 PTPRN2Q92932 1015 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 FCRL5Q96RD9 977 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 HINFPQ9BQA5 517 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 ERP44Q9BS26 406 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 CEP44Q9C0F1 390 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 GBA3Q9H227 469 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 ETNK1Q9HBU6 452 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 ZDHHC4Q9NPG8 344 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 PAK5Q9P286 719 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 KLHL8Q9P2G9 620 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 SLC25A13Q9UJS0 675 aa11.43□□□□□ -0.58
SREBF1-209ENST00000470247 MTF2Q9Y483 593 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-209ENST00000470247 ATG2BQ96BY7 2078 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 MUC22E2RYF6 1773 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 EFCAB8A8MWE9 144 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 MAN2B1O00754 1011 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 INSIG1O15503 277 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 ADAM23O75077 832 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 GAS8O95995 478 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 CHRNB1P11230 501 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 HLA-EP13747 358 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 PRKCHP24723 683 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 TARSP26639 723 aaKnown RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 PSMB4P28070 264 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 HSPA9P38646 679 aaKnown RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 RPL21P46778 160 aaKnown RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 CSNK1DP48730 415 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 VPS41P49754 854 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 SKOR1P84550 965 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 ZXDAP98168 799 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 DSC2Q02487 901 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 PPP1R7Q15435 360 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 PARP6Q2NL67 630 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 GLE1Q53GS7 698 aaKnown RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 ATXN7L2Q5T6C5 722 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 FAXCQ5TGI0 409 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 KCTD11Q693B1 232 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 C22orf39Q6P5X5 142 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 PCDH20Q8N6Y1 951 aaKnown RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 ZNF366Q8N895 744 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 IL17RCQ8NAC3 791 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 OR2A12Q8NGT7 310 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 SPATA22Q8NHS9 363 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 KCNV2Q8TDN2 545 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 UCMAQ8WVF2 138 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 IMP4Q96G21 291 aaKnown RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 OXNAD1Q96HP4 312 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 EXOC2Q96KP1 924 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 MLPHQ9BV36 600 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 CINPQ9BW66 212 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-209ENST00000470247 SLC25A51Q9H1U9 297 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 EPC1Q9H2F5 836 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 TNKS2Q9H2K2 1166 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 PLA2G4CQ9UP65 541 aa11.42□□□□□ -0.58
SREBF1-209ENST00000470247 TCRBV7S3A2A0A539 114 aa11.41□□□□□ -0.58
SREBF1-209ENST00000470247 F5H423 210 aaPredicted RBP11.41□□□□□ -0.58
SREBF1-209ENST00000470247 STK10O94804 968 aaKnown RBP11.41□□□□□ -0.58
SREBF1-209ENST00000470247 MT-CYBP00156 380 aaPredicted RBP11.41□□□□□ -0.58
SREBF1-209ENST00000470247 GSRP00390 522 aa11.41□□□□□ -0.58
SREBF1-209ENST00000470247 TIE1P35590 1138 aa11.41□□□□□ -0.58
SREBF1-209ENST00000470247 MAGEA6P43360 314 aa11.41□□□□□ -0.58
SREBF1-209ENST00000470247 DRG2P55039 364 aaKnown RBP11.41□□□□□ -0.58
SREBF1-209ENST00000470247 RHOAP61586 193 aa11.41□□□□□ -0.58
SREBF1-209ENST00000470247 MRPS21P82921 87 aaKnown RBP11.41□□□□□ -0.58
SREBF1-209ENST00000470247 GPS1Q13098 491 aa11.41□□□□□ -0.58
SREBF1-209ENST00000470247 SEMA5AQ13591 1074 aa11.41□□□□□ -0.58
SREBF1-209ENST00000470247 ZNF235Q14590 738 aa11.41□□□□□ -0.58
SREBF1-209ENST00000470247 HNRNPA1L2Q32P51 320 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms