RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 PCMTD1Q96MG8 357 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-208ENST00000469802 AGPAT1Q99943 283 aa16.63■□□□□ 0.25
COL9A3-208ENST00000469802 SELENOOQ9BVL4 669 aa16.63■□□□□ 0.25
COL9A3-208ENST00000469802 MAGEB5Q9BZ81 275 aa16.63■□□□□ 0.25
COL9A3-208ENST00000469802 FCF1Q9Y324 198 aaKnown RBP16.63■□□□□ 0.25
COL9A3-208ENST00000469802 ACTL7AQ9Y615 435 aa16.63■□□□□ 0.25
COL9A3-208ENST00000469802 LRRK1Q38SD2 2015 aa16.63■□□□□ 0.25
COL9A3-208ENST00000469802 DSPP15924 2871 aaKnown RBP16.63■□□□□ 0.25
COL9A3-208ENST00000469802 ANKRD36A6QL64 1941 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 APC2O95996 2303 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 A0A1W2PQU0 124 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 TAF4O00268 1085 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 MAGEC1O60732 1142 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 PLEKP08567 350 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-208ENST00000469802 RECQLP46063 649 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-208ENST00000469802 CCNHP51946 323 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-208ENST00000469802 SMAD1Q15797 465 aaKnown RBP16.62■□□□□ 0.25
COL9A3-208ENST00000469802 CARD16Q5EG05 197 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 ARSIQ5FYB1 569 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 TBC1D31Q96DN5 1066 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 DYRK4Q9NR20 520 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 TMEM63CQ9P1W3 806 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 ZFR2Q9UPR6 939 aaKnown RBP16.62■□□□□ 0.25
COL9A3-208ENST00000469802 CA5BQ9Y2D0 317 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 PCDHGA1Q9Y5H4 931 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 ACACAQ13085 2346 aa16.62■□□□□ 0.25
COL9A3-208ENST00000469802 CCP110O43303 1012 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 ITGAVP06756 1048 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 ADRB3P13945 408 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 PRLRP16471 622 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
COL9A3-208ENST00000469802 NEK3P51956 506 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 ZNF143P52747 638 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-208ENST00000469802 STAT4Q14765 748 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 RWDD4Q6NW29 188 aaKnown RBP16.61■□□□□ 0.25
COL9A3-208ENST00000469802 DNAJC24Q6P3W2 148 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 GALNT15Q8N3T1 639 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 BAP1Q92560 729 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 BPIFA3Q9BQP9 254 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 HEPHQ9BQS7 1158 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 MAGEH1Q9H213 219 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 DNAI1Q9UI46 699 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 MYO6Q9UM54 1294 aa16.61■□□□□ 0.25
COL9A3-208ENST00000469802 ITPR1Q14643 2758 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 ADAMTS20P59510 1910 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 ZFYVE26Q68DK2 2539 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 GOLGA8CPA6NN73 597 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 ENC1O14682 589 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 SLC31A1O15431 190 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 AP1G1O43747 822 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 RAMP2O60895 175 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 FERP16591 822 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 L1CAMP32004 1257 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 ACADVLP49748 655 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 GEMIN4P57678 1058 aaKnown RBP16.6■□□□□ 0.25
COL9A3-208ENST00000469802 RPL7AP62424 266 aaKnown RBP16.6■□□□□ 0.25
COL9A3-208ENST00000469802 BNIP3Q12983 259 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 CAMK2BQ13554 666 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 SEL1L3Q68CR1 1132 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 GCNT7Q6ZNI0 430 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 PARS2Q7L3T8 475 aaKnown RBP16.6■□□□□ 0.25
COL9A3-208ENST00000469802 IRF2BP2Q7Z5L9 587 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 SLFN11Q7Z7L1 901 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 RTL3Q8N8U3 475 aaKnown RBP16.6■□□□□ 0.25
COL9A3-208ENST00000469802 TSC1Q92574 1164 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 CNDP2Q96KP4 475 aaKnown RBP16.6■□□□□ 0.25
COL9A3-208ENST00000469802 MCEEQ96PE7 176 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 TM6SF2Q9BZW4 377 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 NOL6Q9H6R4 1146 aaKnown RBP16.6■□□□□ 0.25
COL9A3-208ENST00000469802 GPR27Q9NS67 375 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 SEPT11Q9NVA2 429 aaKnown RBP16.6■□□□□ 0.25
COL9A3-208ENST00000469802 DKK4Q9UBT3 224 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 LAMA5O15230 3695 aa16.6■□□□□ 0.25
COL9A3-208ENST00000469802 TEX33O43247 280 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 GSRP00390 522 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 THEGLP0DJG4 465 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 HNRNPA2B1P22626 353 aaKnown RBP16.59■□□□□ 0.25
COL9A3-208ENST00000469802 AIF1P55008 147 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 ANO6Q4KMQ2 910 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 KIAA1161Q6NSJ0 714 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 DHRS13Q6UX07 377 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 ABI3BPQ7Z7G0 1075 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 MCOLN2Q8IZK6 566 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 PYROXD2Q8N2H3 581 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 EID2Q8N6I1 236 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 OR2AP1Q8NGE2 309 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 KLK6Q92876 244 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 KLHDC7BQ96G42 594 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 LRIG1Q96JA1 1093 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 MYOCQ99972 504 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 CNPY3Q9BT09 278 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 NAT10Q9H0A0 1025 aaKnown RBP16.59■□□□□ 0.25
COL9A3-208ENST00000469802 ZDHHC6Q9H6R6 413 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 FZD3Q9NPG1 666 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
COL9A3-208ENST00000469802 HECAQ9UBI9 543 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-208ENST00000469802 FADS3Q9Y5Q0 445 aa16.59■□□□□ 0.25
COL9A3-208ENST00000469802 KNTC1P50748 2209 aa16.58■□□□□ 0.25
COL9A3-208ENST00000469802 WASH4PA8MWX3 477 aa16.58■□□□□ 0.24
COL9A3-208ENST00000469802 SPINT1O43278 529 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms