RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 EPM2AIP1Q7L775 607 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 PRPF39Q86UA1 669 aaKnown RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 PIGZQ86VD9 579 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 OXR1Q8N573 874 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 XXYLT1Q8NBI6 393 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 TMEM145Q8NBT3 493 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF507Q8TCN5 953 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 PARD3BQ8TEW8 1205 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 EDARADDQ8WWZ3 215 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 JPH3Q8WXH2 748 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SYAP1Q96A49 352 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 FAM131CQ96AQ9 280 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 PPP1R13BQ96KQ4 1090 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 BMFQ96LC9 184 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SEMA3CQ99985 751 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 CALN1Q9BXU9 219 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 DUSP16Q9BY84 665 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ULBP1Q9BZM6 244 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 FOXP3Q9BZS1 431 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SLC25A18Q9H1K4 315 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 FBRSQ9HAH7 460 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 KLHL11Q9NVR0 708 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 TJP2Q9UDY2 1190 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 XPO7Q9UIA9 1087 aaKnown RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 STOML2Q9UJZ1 356 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 FBXO2Q9UK22 296 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 FZD4Q9ULV1 537 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SCML1Q9UN30 329 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SOX13Q9UN79 622 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 ZFR2Q9UPR6 939 aaKnown RBP5.45□□□□□ -1.54
PTPN4-209ENST00000469511 PCDHGA8Q9Y5G5 932 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 CHD5Q8TDI0 1954 aa5.45□□□□□ -1.54
PTPN4-209ENST00000469511 SPENQ96T58 3664 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 A0A1W2PQU0 124 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 EME2A4GXA9 379 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 POM121BA6NF01 834 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 YJEFN3A6XGL0 299 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 E7ENQ6 273 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 PIK3R2O00459 728 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 KIAA0391O15091 583 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 SCAMP1O15126 338 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 MUSKO15146 869 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 RAD51BO15315 384 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 PLRG1O43660 514 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 RNASEH1O60930 286 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 RNGTTO60942 597 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 GCATO75600 419 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 RGS9O75916 674 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 WFS1O76024 890 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 GJB6O95452 261 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 GP1BAP07359 652 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 CD58P19256 250 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 C5AR1P21730 350 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 UGT1A5P35504 534 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 GMPRP36959 345 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 UQCRFS1P47985 274 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 TKTL1P51854 596 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 SERINC3Q13530 473 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 C1orf61Q13536 156 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 FGL2Q14314 439 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 FZD2Q14332 565 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 SLC45A4Q5BKX6 768 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 PITRM1Q5JRX3 1037 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 ADGRF1Q5T601 910 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 ADAMTSL4Q6UY14 1074 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 RBM44Q6ZP01 1051 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 RSRC2Q7L4I2 434 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 IQCHQ86VS3 1027 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 JAMLQ86YT9 394 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 MFN1Q8IWA4 741 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 RBFAQ8N0V3 343 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 CARNMT1Q8N4J0 409 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 FAM26EQ8N5C1 309 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 PDILTQ8N807 584 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 GALNT6Q8NCL4 622 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 OR52K2Q8NGK3 314 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 WDR36Q8NI36 951 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 FIBINQ8TAL6 211 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF564Q8TBZ8 553 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 FRS2Q8WU20 508 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 MUC3BQ9H195 1237 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 LRRC4CQ9HCJ2 640 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 ZNF71Q9NQZ8 489 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 GEMIN8Q9NWZ8 242 aaKnown RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 DNAJC28Q9NX36 388 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 NLGN3Q9NZ94 848 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 FOXJ2Q9P0K8 574 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 STK17AQ9UEE5 414 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 PLEKHB1Q9UF11 243 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-209ENST00000469511 TRIM33Q9UPN9 1127 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 ITIH6Q6UXX5 1313 aa5.44□□□□□ -1.54
PTPN4-209ENST00000469511 F8P00451 2351 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 LRBAP50851 2863 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 ANKRD36A6QL64 1941 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 CCDC187A0A096LP49 1063 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 EDDM13A0A1B0GTR0 161 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 A0A1W2PQM1 296 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 A1L4Q6 167 aa5.43□□□□□ -1.54
PTPN4-209ENST00000469511 TARSL2A2RTX5 802 aaKnown RBP5.43□□□□□ -1.54
PTPN4-209ENST00000469511 PRAMEF26H0Y7S4 382 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms