RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 MFSD6LQ8IWD5 586 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 RSPH1Q8WYR4 309 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 SPC25Q9HBM1 224 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 PCDH10Q9P2E7 1040 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 ZDHHC2Q9UIJ5 367 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 STX16-NPEPL1H3BU86 382 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 PSMD5Q16401 504 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 ARHGAP12Q8IWW6 846 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 TCF7L2Q9NQB0 619 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 SSX2IPQ9Y2D8 614 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 KCTD3Q9Y597 815 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 PTCH2Q9Y6C5 1203 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 AK5Q9Y6K8 562 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 ENO4A6NNW6 628 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 NT5C1B-RDH14C9J2C7 533 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 MAP3K13O43283 966 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 LMNAP02545 664 aaKnown RBP18.09■□□□□ 0.49
MCF2L-221ENST00000469415 ENO3P13929 434 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-221ENST00000469415 CCND3P30281 292 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-221ENST00000469415 SLC1A2P43004 574 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 TAS2R39P59534 338 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 DCLRE1AQ6PJP8 1040 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 TMC7Q7Z402 723 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 SNX32Q86XE0 403 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 NDE1Q9NXR1 346 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 DNAJB4Q9UDY4 337 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 IPO11Q9UI26 975 aaKnown RBP18.09■□□□□ 0.49
MCF2L-221ENST00000469415 ACTL7AQ9Y615 435 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 FAM95CA0A1B0GW59 222 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 NCAM2O15394 837 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 IRAK2O43187 625 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 DUSP11O75319 330 aaKnown RBP18.08■□□□□ 0.49
MCF2L-221ENST00000469415 HDCP19113 662 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 CCR1P32246 355 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 CPOXP36551 454 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 SLC12A2P55011 1212 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 USP46P62068 366 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 SCD5Q86SK9 330 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 FAM156AQ8NDB6 213 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 APBB2Q92870 758 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 CDH19Q9H159 772 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 GLOD4Q9HC38 313 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 TRHDEQ9UKU6 1024 aa18.08■□□□□ 0.49
MCF2L-221ENST00000469415 TXNDC9O14530 226 aa18.08■□□□□ 0.48
MCF2L-221ENST00000469415 CD86P42081 329 aa18.08■□□□□ 0.48
MCF2L-221ENST00000469415 SCAPQ12770 1279 aa18.08■□□□□ 0.48
MCF2L-221ENST00000469415 TBL3Q12788 808 aaKnown RBP18.08■□□□□ 0.48
MCF2L-221ENST00000469415 C17orf99Q6UX52 265 aa18.08■□□□□ 0.48
MCF2L-221ENST00000469415 THEM5Q8N1Q8 247 aa18.08■□□□□ 0.48
MCF2L-221ENST00000469415 STX18Q9P2W9 335 aaKnown RBP18.08■□□□□ 0.48
MCF2L-221ENST00000469415 CRYL1Q9Y2S2 319 aa18.08■□□□□ 0.48
MCF2L-221ENST00000469415 ZNF195O14628 629 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 TIMM44O43615 452 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 MAFKO60675 156 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 DDHD2O94830 711 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 SLC35E2BP0CK96 405 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 HAPLN1P10915 354 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-221ENST00000469415 GCKP35557 465 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 SLC10A7Q0GE19 358 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 ASPHQ12797 758 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 DLG1Q12959 904 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 LPIN1Q14693 890 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 ANO4Q32M45 955 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 CCDC153Q494R4 210 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 DNAL1Q4LDG9 190 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 CYS1Q717R9 158 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 ACBD6Q9BR61 282 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 ILKAPQ9H0C8 392 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-221ENST00000469415 GIT1Q9Y2X7 761 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 ACOT9Q9Y305 439 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 PCDHB12Q9Y5F1 795 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 HS3ST4Q9Y661 456 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 CCDC189A1A4V9 331 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 KLHL2O95198 593 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 IL1BP01584 269 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 NPY2RP49146 381 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 DSC2Q02487 901 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 LSM12Q3MHD2 195 aaKnown RBP18.07■□□□□ 0.48
MCF2L-221ENST00000469415 ALFQ53S48 1182 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 PKN3Q6P5Z2 889 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 CD300LGQ6UXG3 332 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 SDCCAG8Q86SQ7 713 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-221ENST00000469415 MAB21L3Q8N8X9 362 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 CDY1Q9Y6F8 540 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 ATP6AP2A0A1C7CYW4 349 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 E9PAM4 449 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 ATP6AP2O75787 350 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 COX4I1P13073 169 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 TFEBP19484 476 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 KLC1Q07866 573 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 KLF10Q13118 480 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 BLMHQ13867 455 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 SERINC5Q86VE9 423 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 RASAL3Q86YV0 1011 aa18.07■□□□□ 0.48
MCF2L-221ENST00000469415 DLX3O60479 287 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 MAGEC1O60732 1142 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 SBK3P0C264 359 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 WNT3AP56704 352 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 ACTR3P61158 418 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 PRKCZQ05513 592 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms